Gene SeSA_A1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1664 
Symbol 
ID6519269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1598148 
End bp1599056 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content53% 
IMG OID642746772 
ProductLysR substrate binding domain protein 
Protein accessionYP_002114575 
Protein GI194736666 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGA ATATGCTGGA AGCCATGAAT ATTTATGTCA ATGTGGTAGA GCAAGGGAGC 
TTTATCCGCG CGGCGGAGGT GCTTGAGCTG CACCGCCCTG CTGTTACCCG CGCCGTTCAG 
AATCTGGAAC ATGATCTGGG CGTTAAGCTC CTGCATCGCA CAACACGACA GGTCAGTATG 
ACGGATGAAG GGGAAGAGTT TTACCAGCGT TGCCTGTTGC TCTTAAGCGA GCTGGACGAC 
GTCCGGCGAT TATTTTCCAG CACGCAACCG CCGAAAGGCC GCCTGCGCCT TGACGTCCCT 
ATTACGCTCG CCCGGGCAGT CATCATTCCG GCTCTTGGAG ATTTTCAGAA CCGATACCCG 
GATATTGAGA TTGTACTTGG CACGTCCGAT CGCAAGATTG ATTTGATTGC CGAGCGTGTG 
GACTGCGTCA TCCGACTTGG TGAGCTTAAT GACTCCAGTT TTGTTGCCAG ACGTCTGGGA 
ACGGCAGCCA TGGTGACTTG TGCTGCGCCA TCTTATCTTG CGAAGCATGG CACGCCGCAC 
TCTATCGATG AGCTGATGAA GTCCCACCGG GCTGTAAATT TTTTCAGTAA TCACAGCCTG 
CAGATAATGG AGTGGAAATT CACGGTTGAT GGCAGTATTG CGTCAATAAA AGTTCCCTCC 
AGCATCCTGG TAGACAATTC AGAAGCGTTT CTTTCATGTG GGCTGGCGGG GTTGGGGATT 
CTACACGGAT TGCGTCCGTC GCTTGCACCC TTTATTGCCA GTGGAGAGCT GACAGAGATC 
CTCACTGATT TCCCGCCCCC GCCAAAACCG GTTTCACTGC TTTACCCGGA TCGTCGGTAT 
CTGGCACCTA AAGTTCGTGT ATTCATCGAC TGGCTGTGCG AGGTTTTTGG TCCGGATGCA 
CATCTCTGA
 
Protein sequence
MQLNMLEAMN IYVNVVEQGS FIRAAEVLEL HRPAVTRAVQ NLEHDLGVKL LHRTTRQVSM 
TDEGEEFYQR CLLLLSELDD VRRLFSSTQP PKGRLRLDVP ITLARAVIIP ALGDFQNRYP 
DIEIVLGTSD RKIDLIAERV DCVIRLGELN DSSFVARRLG TAAMVTCAAP SYLAKHGTPH 
SIDELMKSHR AVNFFSNHSL QIMEWKFTVD GSIASIKVPS SILVDNSEAF LSCGLAGLGI 
LHGLRPSLAP FIASGELTEI LTDFPPPPKP VSLLYPDRRY LAPKVRVFID WLCEVFGPDA 
HL