Gene SeSA_A1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1560 
Symbol 
ID6517054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1500289 
End bp1501329 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content56% 
IMG OID642746672 
Productputative oxidoreductase 
Protein accessionYP_002114475 
Protein GI194735214 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000251187 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA AAATCCGCGT TGGGTTAATC GGTTATGGCT ACGCCAGTAA AACCTTTCAT 
GCGCCCTTAA TTATGGGAAC GCCAGGGCTA GAGCTTGCGG CGGTATCCAG CAGCGATGAA 
ACAAAAGTGA AAGCAGACTG GCCGGCGGTT TCCGTGGTCT CTGAGCCCCG ACATTTATTT 
AACGATCCGC ATATCGACCT GATCGTGATC CCGACGCCCA ACGATACCCA TTTCCCGCTG 
GCGAAAGCTG CGCTGGAAGC CGGTAAGCAT GTGGTGGTTG ATAAACCCTT TACCGTGACA 
CTGTCACAGG CGCGAGAATT GGATGCGCTT GCGCGGAGCA CTGGTCGGGT ACTTTCCGTC 
TTCCACAACC GACGCTGGGA CAGCGATTTT TTGACGCTGA AGGCCTTGCT GGCGGATGGC 
GTGCTCGGCG AGGTGTCCTT GTTTGAATCC CACTTTGATC GCTTCCGTCC CCAGGTGCGC 
GACCGCTGGC GCGAGCAAGG CGGGCCAGGA AGTGGTATCT GGTACGATCT GGCGCCGCAC 
TTGTTGGATC AGGCCATTCA ACTTTTTGGC CTGCCGGTCA GCATGACGGT GGATTTAGCG 
CAGCTGCGTC CGGGTGCGCA ATCTACAGAT TATTTCCACG CGATTTTATC CTACCCCCAG 
CGCCGCGTGA TTTTGCACGG TACGATGCTG GCCGCGGCGG AATCCGCGCG ATACATCGTT 
CATGGTTCGC GCGGTAGCTA TGTAAAATAT GGCCTCGATC CCCAGGAAGA ACGGTTAAAA 
AACGGCGAGC GTTTACCGCA GGAAGACTGG GGATACGACA TGCGTGACGG CGTATTGACC 
CTGGTTGAGG GAGAGACGCG CAAAGAAGAG AACTGGCTTA CGTTGCCGGG TAACTATCCG 
GCATATTATG CCGCCATCCG CGATGCGTTA AACGGTAACG GTGAAAATCC CGTGCCGGCA 
AGCCAGGCGA TTCAAATTAT GGAGTTGATT GAACTGGGCA TGGAATCGGC AAAACATCGC 
GCGACGCTGT GTCTTGCCTG A
 
Protein sequence
MNDKIRVGLI GYGYASKTFH APLIMGTPGL ELAAVSSSDE TKVKADWPAV SVVSEPRHLF 
NDPHIDLIVI PTPNDTHFPL AKAALEAGKH VVVDKPFTVT LSQARELDAL ARSTGRVLSV 
FHNRRWDSDF LTLKALLADG VLGEVSLFES HFDRFRPQVR DRWREQGGPG SGIWYDLAPH 
LLDQAIQLFG LPVSMTVDLA QLRPGAQSTD YFHAILSYPQ RRVILHGTML AAAESARYIV 
HGSRGSYVKY GLDPQEERLK NGERLPQEDW GYDMRDGVLT LVEGETRKEE NWLTLPGNYP 
AYYAAIRDAL NGNGENPVPA SQAIQIMELI ELGMESAKHR ATLCLA