Gene SeSA_A1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1538 
Symbol 
ID6516964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1480462 
End bp1482501 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content56% 
IMG OID642746650 
Productfusaric acid resistance domain protein 
Protein accessionYP_002114453 
Protein GI194734872 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0513426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT CCCTGCCGGC CCTGCGAAAT ACGCCCTGGT TTAAAGCGAC CTCCGGCCAG 
TGGCGTTACG CGTTGCGCAA TACCATTGCT ATGTGTCTCG CGCTGACATT CGCTTATTAT
CTCAATCTGG ATGAGCCCTA CTGGGCGATG ACTTCGGCCG CAGTGGTGAG CTTTCCGACC
GTAGGCGGCG TAATCAGTAA AAGTCTGGGG CGTATTGCCG GGAGTTTACT CGGCGCGACC
GCCGCGTTAA TTATTGCCGG CCATACGCTG AATGAACCCT GGTTATTCTT ATTTAGCATG
GCCGCCTGGA TCGGTTTTTG TACCTGGGCC TGCGCGCATT TTACCAATAA TGCCGCTTAT
GCTTTCCAGT TGTCCGGCTA CACGGCGGCA ATCATCGCGT TCCCGATGGT TAATATTGTA
GAAATCACGC AGTTGTGGGA TATCGCCCAG GCACGTGTAT GTGAAGTTAT CGTCGGCATC
CTCTGTGGCG GCATGATGAT GATGATCCTG CCCAGCACAT CGGATGGCAC AGCCCTGCTC
ACCGCGTTGA AAAACATGCA TGCGCGCTTG CTGGAACATG CCAGTCTACT TTGGCAGCCG
GAGACTACCG ACGCCATCCG CTCCGCGCAT GAGGGCGTCA TTGGGCAAAT CCTGACCATG
AACCTGCTGC GTATTCAGGC CTTCTGGAGT CACTACCGTT TTCGCCGCCA GAATGCATTG
CTAAATGCAT TGTTACACCA GCAATTACGG CTAACCAGCG TGATCTCCAG TCTGCGTAGA
ATGCTTTTAA ACTGGCCGAC GCCGCCGGAA AACAGCCGCG AAGTTATTGA ACAACTCTTA
GCTGCGCTGG CGAAACCGCG CGCGGACAGC TACACCGTGG CGCGGATTAT TGCGCCGCTA
CGCCCGCAGG ATGAACAGGA TTATCGTCAC CTCGCGTTCT GGCAGCGATT ACGCTATTTT
TGCCACTTAT ATCTGCGCAG CAGCCGCCAG TTATATCTGA TCGAAAGCGG CGCGCCGGTG
GATCAAATCC ATATCCGCCG CACTCCCGGC CTTGCGCGGC ATACGGATAA CGCAGAGGCC
ATCTGGAGCG GCGTGCGTAC CTTTTGCACG CTCACGGTGA TTGGCGCCTG GAGTATTGGC
GCGCAATGGG AATCCGGGCC CGGCGCATTA ACCCTGGCGG CGATCAGTTG TGTCCTCTAC
TCCATCGTCG CCACGCCGTT TAAGTCGCTC ACCTTATTGA TGCGAACTTT AGTGCTGCTG
TCCTTATTCA GCTTCGTGGT GAAATTTGGC CTGATGGTGC AAATCACCGA TCTGTGGCAA
TTCTTGCTTT TCCTTTTTCC GCTGTTCGTC ACGATGCAAC TGCTTAAACT GCAGATGCCT
AAGCTGGCGG GACTGTGGGG GCAGCTTATC GTTTTTATGG GCTCATTCAT CGCCGTGACC
AATCCGCCGG TGTACGACTT CGCCGACTTC CTTAACGATA ATACCGCCAA GATTGTCGGC
GTCGCGATTT CCTGGCTGGC GTTTGCGATT TTGCGCCCCG GTTCCGATGC CGTAAAAAGT
CGCCGCCATA TCCGCGCGCT ACGCCGGGAT TTCGTCGATC AGCTTAGCCG TCATCCTTCC
CATAGCGAAA GCGAGTTTGA ATCGCTGACC TATCATCACG TCAGTCAGCT CAGCAATAGC
CAGGATGCGC TGGCGCGCCG GTGGTTATTA CGTTGGGGAG TGGTACTGCT GAACTGCTCG
CATGTGGTGT GGCAGCTGCG CGCCTGGGAG TCGCGTTCCG ATCCGCTTTC CCGGGTGCGG
GATATTTGTA TATCCCTGCT GCGTGATGTG ATGAGCGAGC GCGGCGTGCA GCAACGCCCG
CTTGCCGTCT CGCTACAGGA ATTACAGCGT ATCTGCGACA CGCTCGCACA TCATCATCAG
CCCGCCGCGC ATGAGCTGGC GGCGATTATC TGGCGTTTAC ACTGTTCGCT GTCGCAGCTG
GAACAGGCTC CAGCGCAGGG AACACTGTCT CCGGGTTATT TAATGACGCC GCAGGCGTAA
 
Protein sequence
MKLSLPALRN TPWFKATSGQ WRYALRNTIA MCLALTFAYY LNLDEPYWAM TSAAVVSFPT 
VGGVISKSLG RIAGSLLGAT AALIIAGHTL NEPWLFLFSM AAWIGFCTWA CAHFTNNAAY
AFQLSGYTAA IIAFPMVNIV EITQLWDIAQ ARVCEVIVGI LCGGMMMMIL PSTSDGTALL
TALKNMHARL LEHASLLWQP ETTDAIRSAH EGVIGQILTM NLLRIQAFWS HYRFRRQNAL
LNALLHQQLR LTSVISSLRR MLLNWPTPPE NSREVIEQLL AALAKPRADS YTVARIIAPL
RPQDEQDYRH LAFWQRLRYF CHLYLRSSRQ LYLIESGAPV DQIHIRRTPG LARHTDNAEA
IWSGVRTFCT LTVIGAWSIG AQWESGPGAL TLAAISCVLY SIVATPFKSL TLLMRTLVLL
SLFSFVVKFG LMVQITDLWQ FLLFLFPLFV TMQLLKLQMP KLAGLWGQLI VFMGSFIAVT
NPPVYDFADF LNDNTAKIVG VAISWLAFAI LRPGSDAVKS RRHIRALRRD FVDQLSRHPS
HSESEFESLT YHHVSQLSNS QDALARRWLL RWGVVLLNCS HVVWQLRAWE SRSDPLSRVR
DICISLLRDV MSERGVQQRP LAVSLQELQR ICDTLAHHHQ PAAHELAAII WRLHCSLSQL
EQAPAQGTLS PGYLMTPQA