Gene SeSA_A1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1486 
Symbol 
ID6515804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1438096 
End bp1439055 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content56% 
IMG OID642746599 
Productputative pathogenicity island protein 
Protein accessionYP_002114404 
Protein GI194736152 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.487768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.354235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA AACCCGTAGT CGGCATTAGC GGATGTCTGA CTGGCGCCGC GGTACGCTTT 
GATGGCGGAC ATAAGCGTAT GGATTTCGTC ATGAACTCTC TGGCACCGTG GGTGGCCTAC 
AAACCGATCT GCCCGGAGGT GGCGATCGGC CTGCCCGTGC CCCGCCCTGC GCTGCGTCTT 
ATCCAGACGA CCTGTGGCGA CATTCGGATG CGCTATAGCC ATGCCCCGCA CGATGACGTT 
ACCGAGCGAA TGAATGCCTT TACCGATCGG TTTCTGCCAA CAATAGGCGA ACTGGCGGGG 
TTTATTGTGT GTGCAAAATC GCCCAGTTGC GGAATGGAGC GCGTTCGCCT GTATGATGAA 
AAGGGTAACA GGGGCCGCAA AGCTGGCACG GGGCTGTTTA CCGCCGCGAT GATGGACAAA 
TATCCCTGGC TGCCGATAGA GGAAGATGGT CGCCTGCACG ATCCGGTACT ACGCGAGAAT 
TTCATCGCAC GTATCTTCGC GCTACATGAA TTAAATGCGC TACGCGCGCA GGGCTTGAGT 
CGTCACAGTT TGCTCGCGTT TCATAGCCGA TACAAACTTC AGCTTCTCGC CCACCACCAG 
GCCGGCTACC GCGAAATTGG CCCTTTCGTC GCGCGTCTGC ATGAGTGGGA CGATCTGGAT 
GCCTTCTTTG TCCGATACAG AGAAAAACTG ATGGCTATCC TGCGCCATCC CGCTTCACGT 
AAAAATCACA CCAATGTGCT GATGCATATC CAGGGCTATT TTCACCGCGC GTTGAACAGC 
AGGCAACGCG CGGAATTACG CGAGGTGATT CTCGGCTACC GGGCGGGCCG ACTACCTATC 
CTGGCACCGT TAACGCTGCT GAAGCACTAT CTGGCGGAAC ATCCGGATGA CTATCTACGC 
AGCCAGAATT ATTTTGAGCC GTACCCTGAT ACATTAGGGC TGCGCTTAGC CATCAACTGA
 
Protein sequence
MNNKPVVGIS GCLTGAAVRF DGGHKRMDFV MNSLAPWVAY KPICPEVAIG LPVPRPALRL 
IQTTCGDIRM RYSHAPHDDV TERMNAFTDR FLPTIGELAG FIVCAKSPSC GMERVRLYDE 
KGNRGRKAGT GLFTAAMMDK YPWLPIEEDG RLHDPVLREN FIARIFALHE LNALRAQGLS 
RHSLLAFHSR YKLQLLAHHQ AGYREIGPFV ARLHEWDDLD AFFVRYREKL MAILRHPASR 
KNHTNVLMHI QGYFHRALNS RQRAELREVI LGYRAGRLPI LAPLTLLKHY LAEHPDDYLR 
SQNYFEPYPD TLGLRLAIN