Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1469 |
Symbol | sufD |
ID | 6516841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1418886 |
End bp | 1420157 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642746582 |
Product | cysteine desulfurase activator complex subunit SufD |
Protein accession | YP_002114387 |
Protein GI | 194737662 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.866432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0690013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCT TACCGAACAG CAGTAAAGCG CTACAGCAAT GGCAGCATCT CTTTGAAGAA AAAGGAGTAA GTCGAACTGA GCAGGCAAGA CAACATTTAC AACAGATGTT ACGTCTGGGA TTGCCGACGC GTAAACATGA AGACTGGAAA TACACGCCGC TGGAGGGCTT AACCCATAGC CAGTTTATCC AGCAGTGTGC GACTATCAGC GCCGCACAGC GTGATGCGCT GGCGCTGCAA ATCGATGCCG TGCGGCTGGT GTTTGTCGAT GGTCGGTTTA TGCCAGAGCT CAGTGATAGC ACGCAAAACA GCGGATTTGA CGTTAGCGTC AGGGATGAGC GCCAGACGCT TGCCGCGCCG GTACATCCCG AGGTTTTTCT GCATCTGACG GAAAGCCTGG CGCAATGTGT CACGTATATA CAGGTACGGC GAAATCAGCG TCCGACCAAG CCGCTACTGT TAATGCATAT CACGCAGGGC GTGGATAGCG ACGAGCTGAA TACCGCGCAT TATCGCCACC ATCTGGCGCT GGCGGAAGGC GCGGAAGCGA CGGTTATTGA GCATTATGTC AGCCTTACAG CGGCAAAACA TTTTACCGGC GCGCGTCTGA CGATGAACGT TGCAGACAAT GCGCAACTGC GTCATATCAA ACTGGCGTTT GAAAATGCGT CCAGTTATCA CTTTGCGCAT AACGATCTTC TGCTGGCGAC AGACGCCTCG GCGTTTAGCC ACAGTTTTCT GCTGGGCGCC GCAGTACTAC GTCACCACAG CAGCTCACAA CTGAATGGCG AAAACGCGAC GCTTCGACTG AATAGTCTGG CGATGCCGGT GAAAAATGAA GTCTGCGATA CGCGGACATG GCTGGAACAT AACAAAGGTT ACTGTAACAG CCGCCAGTTG CACAAGACCA TCGTCAGCGA CAAAGGACGC GCGGTCTTTA ATGGCCTGAT TAACGTGGCG CAACACGCCA TTAAAACCGA CGGCCAGATG ACCAATAATA ACCTGTTGTT GGGGAAACTG GCTGAAGTCG ATACCAAACC GCAATTAGAG ATCTATGCCG ATGACGTGAA GTGCAGCCAC GGCGCGACGA TCGGGCGTAT TGACGATGAG CAGATGTTTT ATCTGCAATC ACGCGGCATC AGGCAGCAGG AGGCGCGGCA CATGATTCTT TACGCGTTTG CCGCAGAGTT AACGGAAGCT ATCCATGATA GCGCCCTTAA ACAGCAGGTG CTGGCGCGAA TCGGCCAGCG ACTGCCCGGA GGCCTGGTAT GA
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Protein sequence | MAGLPNSSKA LQQWQHLFEE KGVSRTEQAR QHLQQMLRLG LPTRKHEDWK YTPLEGLTHS QFIQQCATIS AAQRDALALQ IDAVRLVFVD GRFMPELSDS TQNSGFDVSV RDERQTLAAP VHPEVFLHLT ESLAQCVTYI QVRRNQRPTK PLLLMHITQG VDSDELNTAH YRHHLALAEG AEATVIEHYV SLTAAKHFTG ARLTMNVADN AQLRHIKLAF ENASSYHFAH NDLLLATDAS AFSHSFLLGA AVLRHHSSSQ LNGENATLRL NSLAMPVKNE VCDTRTWLEH NKGYCNSRQL HKTIVSDKGR AVFNGLINVA QHAIKTDGQM TNNNLLLGKL AEVDTKPQLE IYADDVKCSH GATIGRIDDE QMFYLQSRGI RQQEARHMIL YAFAAELTEA IHDSALKQQV LARIGQRLPG GLV
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