Gene SeSA_A1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1438 
Symbol 
ID6517427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1385988 
End bp1386452 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content49% 
IMG OID642746555 
ProductNlpC (ORF-17) 
Protein accessionYP_002114360 
Protein GI194735392 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0813186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTT GGCTTCTTGT TATCACAGCA TTGTTCCTGG CAGGATGCAG TACTCATCGG 
GCACCGGCGC CAAACGCCAG ATTATCAGAC TCCATTACCG TCATTGCGGG TCTGAACGAT 
CAGTTGCAGT CCTGGCGCGG TACGCCATAC CGTTACGGCG GCATGAGTCG CAGAGGTGTG 
GACTGTTCCG GCTTTGTGGT AGTCACTATG CGCGACAAGT TTGATTTGCA GTTGCCTCGT 
GATACGCGTG AACAATCAAA AATCGGCACC AGAATCGATA AAGATGAATT GCTGCCCGGA 
GATTTGGTTT TCTTTAAAAC CGGTTCGGGC GAAAGTGGTT TACATGTTGG TATTTACGAT 
ACAAATAATG AGTTTATTCA TGCCTCTACC AGTCGTGGCG TGATGCGTTC ATCGCTGGAT 
AATGTGTACT GGCGAAAAAA CTTCTGGCAG GCACGGCGAA TTTAA
 
Protein sequence
MRFWLLVITA LFLAGCSTHR APAPNARLSD SITVIAGLND QLQSWRGTPY RYGGMSRRGV 
DCSGFVVVTM RDKFDLQLPR DTREQSKIGT RIDKDELLPG DLVFFKTGSG ESGLHVGIYD 
TNNEFIHAST SRGVMRSSLD NVYWRKNFWQ ARRI