Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1410 |
Symbol | chbC |
ID | 6519538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1358882 |
End bp | 1360240 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642746528 |
Product | PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC |
Protein accession | YP_002114333 |
Protein GI | 194736376 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component [TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.470901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0748148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACG TCATTGCTTC ACTTGAAAAG GTACTCCTTC CTTTTGCTGT AAAAATAGGA AAGCAGCCAC ACGTTAATGC AATCAAGAAC GGCTTTATTC GTTTAATGCC ATTAACCCTT GCGGGGGCGA TGTTTGTATT AATTAATAAC GTTTTCCTGA GCTTTGGGGA GGGGTCGTTT TTTTATTCCA TGGGCATTCG GCTTGATGCC TCAACCATTG AAACACTTAA TGGATTGAAA GGCATCGGCG GGAACGTCTA TAACGGCACA TTGGGCATTA TGTCGCTCAT GGCGCCATTT TTTATCGGCA TGGCGTTGGC GGAAGAGCGC AAGGTTGATG CGCTGGCCGC CGGACTGCTC TCCGTGGCGG CATTTATGAC CGTAACGCCG TATAGTGTCG GCGAGGCCTA TGCCGTAGGC GCAAACTGGC TGGGCGGCGC GAATATTATC TCCGGTATTA TTATTGGCCT GGTGGTCGCG GAGATGTTTA CATTTATTGT CCGGCGCAAC TGGGTGATTA AACTACCGGA CAGCGTACCG GCTTCGGTGT CTCGTTCATT CTCAGCATTA ATTCCCGGCT TTATTATTCT CTCTATTATG GGGATTATTG CCTGGGCGCT GTCTAATTAC GGTTCTAACT TCCATCAGAT TATTATGGAC ACTATCTCTA CGCCGCTGGC ATCGCTGGGT AGCGTGGTAG GGTGGGCATA TGTCATTTTT GTACCGCTGC TGTGGTTCTT TGGTATTCAT GGTTCGCTGG CGCTGACCGC GCTGGACAGC GGCATCATGA CGCCCTGGGC GCTGGAAAAC ATCTCTATTT ACCAGCAGTA TGGCTCCGTC GATGCGGCGC TGGAAGCCGG TAAAACGTTC CATATCTGGG CGAAACCGAT GCTGGATTCT TATATCTTCC TCGGTGGTAG CGGCGCAACG CTGGGTCTGA TCATCGCTAT CTTCCTCGCA TCTCGTCGCG CGGACTATCG CCAGGTGGCA AAACTGGCGC TGCCGTCAGG TATCTTCCAG ATTAACGAAC CCATCCTGTT TGGTCTGCCG ATTATTATGA ACCCGGTGAT GTTTATCCCC TTTATTCTGG TACAACCGAT TCTGGCGGCG ATTACGCTGG TGGCTTACTA TTTGGGTATT ATTCCGCCGA TTACCAATAT TGCGCCGTGG ACCATGCCAA CCGGGTTGGG GGCGTTCTTT AACACCAACG GCAGTGTCGC CGCGTTGCTG GTTGCGCTAT TTAACCTGGC GGTCGCTACC CTGATTTATC TCCCCTTCGT GGTGGTGGCT AACAAAGCGC AGAACGCCAT CGAGCAGGAA GAAAGCGAAG AAGATATCGC TAACGCACTG AAATTCTAA
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Protein sequence | MSNVIASLEK VLLPFAVKIG KQPHVNAIKN GFIRLMPLTL AGAMFVLINN VFLSFGEGSF FYSMGIRLDA STIETLNGLK GIGGNVYNGT LGIMSLMAPF FIGMALAEER KVDALAAGLL SVAAFMTVTP YSVGEAYAVG ANWLGGANII SGIIIGLVVA EMFTFIVRRN WVIKLPDSVP ASVSRSFSAL IPGFIILSIM GIIAWALSNY GSNFHQIIMD TISTPLASLG SVVGWAYVIF VPLLWFFGIH GSLALTALDS GIMTPWALEN ISIYQQYGSV DAALEAGKTF HIWAKPMLDS YIFLGGSGAT LGLIIAIFLA SRRADYRQVA KLALPSGIFQ INEPILFGLP IIMNPVMFIP FILVQPILAA ITLVAYYLGI IPPITNIAPW TMPTGLGAFF NTNGSVAALL VALFNLAVAT LIYLPFVVVA NKAQNAIEQE ESEEDIANAL KF
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