Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1404 |
Symbol | spy |
ID | 6519615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1355229 |
End bp | 1355714 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642746522 |
Product | periplasmic protein |
Protein accession | YP_002114327 |
Protein GI | 194735449 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.181136 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTAAAC TGACTGCTCT ATTTGTTGCC TCTACCCTGG CGATGGGTGC TGCGAATCTG GCTCATGCCG CTGAGACTAC CACCGCCGCG CCAGCGGATG CGAAGCCAAT GATGCAGCAT AAAGGTAAAT TTGGCCCACA TCACGATATG ATGTTTAAAA ACCTGAACCT GACAGACGCA CAGAAGCAAC AAATTCGCGA CATTATGAAA GCGCAGCGCG AGCAAATGAA ACGTCCGCTG CTGGAAGAGC GTCGCGCCAT GCATGATATT ATTGCCAGCG ATACCTTCGA TAAAGCCAAA GCCGAAGCGC AAATTACGAA AATGGAAGCG CAGCGCAAGG CCAATATGCT GGCGCATATG GAAACCCAGA ATAAAATTTA TAACGTTCTG ACGCCGGAGC AGAAAAAGCA ATATAACGCT AATTTTGAGA AGCGTCTGAC AGAACGCCCG GCGCAAGAAG GTAAAATGCC TGCTGCGGCA GAATAA
|
Protein sequence | MRKLTALFVA STLAMGAANL AHAAETTTAA PADAKPMMQH KGKFGPHHDM MFKNLNLTDA QKQQIRDIMK AQREQMKRPL LEERRAMHDI IASDTFDKAK AEAQITKMEA QRKANMLAHM ETQNKIYNVL TPEQKKQYNA NFEKRLTERP AQEGKMPAAA E
|
| |