Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1333 |
Symbol | |
ID | 6515958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1298903 |
End bp | 1299460 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642746453 |
Product | outer membrane invasion protein |
Protein accession | YP_002114261 |
Protein GI | 194733957 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.670538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TTATTTTATC CACTTTAGTT ATTACTACAG GCGTTTTGGT TGTAAATGTT GCACAGGCCG ATACTAACGC CTTTTCCGTG GGGTATGCAC AAAGTAAAGT TCAGGATTTC AAAAATATCC GAGGGGTAAA TGTGAAATAT CGTTATGAGG ATGACTCTCC GGTAAGTTTT ATTTCCTCGC TAAGTTACTT ATATGGAGAC AGCCAGGCTT CCGGGTCTGT TGAGTCTGAA GGTATTCATT ACCATGACAA GTTTGAGGTG AAGTACGGCT CTTTTATGGT TGGGCCAGCC TATCGATTGT CTGACAATTT TTCGTTATAC GCGCTGGCAG GTGTCGGCAC GGTAAAGGCG ACGTTTAAAG AACATTCCAC TCAGGATGGC GATTCTTTTT CTAACAAAAT TTCCTCAAGG AAAACGGGAT TTGCCTGGGG CGCAGGTGTA CAGATGAATC CGCTGGAGAA TATCGTCGTC GATGTTGGGT ATGAAGGAAG CAACATCTCC TCTACAAAAA TAAACGGCTT CAACGTCGGG GTTGGATACC GTTTCTGA
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Protein sequence | MKNIILSTLV ITTGVLVVNV AQADTNAFSV GYAQSKVQDF KNIRGVNVKY RYEDDSPVSF ISSLSYLYGD SQASGSVESE GIHYHDKFEV KYGSFMVGPA YRLSDNFSLY ALAGVGTVKA TFKEHSTQDG DSFSNKISSR KTGFAWGAGV QMNPLENIVV DVGYEGSNIS STKINGFNVG VGYRF
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