Gene SeSA_A1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1333 
Symbol 
ID6515958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1298903 
End bp1299460 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content43% 
IMG OID642746453 
Productouter membrane invasion protein 
Protein accessionYP_002114261 
Protein GI194733957 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.670538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TTATTTTATC CACTTTAGTT ATTACTACAG GCGTTTTGGT TGTAAATGTT 
GCACAGGCCG ATACTAACGC CTTTTCCGTG GGGTATGCAC AAAGTAAAGT TCAGGATTTC
AAAAATATCC GAGGGGTAAA TGTGAAATAT CGTTATGAGG ATGACTCTCC GGTAAGTTTT
ATTTCCTCGC TAAGTTACTT ATATGGAGAC AGCCAGGCTT CCGGGTCTGT TGAGTCTGAA
GGTATTCATT ACCATGACAA GTTTGAGGTG AAGTACGGCT CTTTTATGGT TGGGCCAGCC
TATCGATTGT CTGACAATTT TTCGTTATAC GCGCTGGCAG GTGTCGGCAC GGTAAAGGCG
ACGTTTAAAG AACATTCCAC TCAGGATGGC GATTCTTTTT CTAACAAAAT TTCCTCAAGG
AAAACGGGAT TTGCCTGGGG CGCAGGTGTA CAGATGAATC CGCTGGAGAA TATCGTCGTC
GATGTTGGGT ATGAAGGAAG CAACATCTCC TCTACAAAAA TAAACGGCTT CAACGTCGGG
GTTGGATACC GTTTCTGA
 
Protein sequence
MKNIILSTLV ITTGVLVVNV AQADTNAFSV GYAQSKVQDF KNIRGVNVKY RYEDDSPVSF 
ISSLSYLYGD SQASGSVESE GIHYHDKFEV KYGSFMVGPA YRLSDNFSLY ALAGVGTVKA
TFKEHSTQDG DSFSNKISSR KTGFAWGAGV QMNPLENIVV DVGYEGSNIS STKINGFNVG
VGYRF