Gene SeSA_A1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1289 
Symbol 
ID6517151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1261196 
End bp1261831 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content54% 
IMG OID642746410 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002114218 
Protein GI194736916 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGG ATACCACGAG TTGCGCGAAG AAAAGCCGTG GCCGACCAAA AGTGTTCGAC 
AGGGAAGCTG CGCTTGATAA GGCCATGACT CTCTTCTGGC AGCACGGCTA TGAAGCAACT 
TCGCTTGCCG ATCTCGTAGA GGCTACCGGG GCGAAAGCGC CTACTCTCTA TGCGGAATTC 
ACTAACAAAG AAGGATTATT TCGCGCTGTC CTGGATCGCT ACATCACTCG CTTTGCCTCA 
AAGCACGAAG CCCAGCTCTT TTGTGAAGAG AAAAGCGTGG AATCGGCGCT GGAAGATTAC 
TTCACAGAAA TTGCCGCCTG CTTTACCAGT ACGGACACGC CGGCTGGCTG CTTTATGATT 
AATACGTCCG CCACCCTCGC CGCCTCCTCA CGCGATATCG CTCGCACGGT AAAATCACGC 
CACGCCATGC AGGAACAGAC GCTCATCCAG TTTTTGCGCC AACGTCAGGA GCGCGGTGAA 
ATTCCGGCGC ACTGTAACCC GCAGGCGCTC GCGGAATATA TCAACTGTAT TTTACAGGGA 
ATGTCGATCA GCGCCCGCGA GGGAGCCACC TTCGAACAAC TGATGCAAAT TACGCGTACG 
ACCCTGCGCA TCTGGCCTGA ACTGCTCAAG TCCTGA
 
Protein sequence
MTTDTTSCAK KSRGRPKVFD REAALDKAMT LFWQHGYEAT SLADLVEATG AKAPTLYAEF 
TNKEGLFRAV LDRYITRFAS KHEAQLFCEE KSVESALEDY FTEIAACFTS TDTPAGCFMI 
NTSATLAASS RDIARTVKSR HAMQEQTLIQ FLRQRQERGE IPAHCNPQAL AEYINCILQG 
MSISAREGAT FEQLMQITRT TLRIWPELLK S