Gene SeSA_A1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1260 
Symbol 
ID6519944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1233575 
End bp1234096 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID642746381 
Producthypothetical protein 
Protein accessionYP_002114189 
Protein GI194736315 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000296903 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.293656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGG TAAAATTACC CCTGACTCTT GATCCGGTTC GTACCGCTCA AAAACGCCTT 
GATTACCAGG GTATCTATAC CCCCGATCAG GTTGAGCGCG TTGCCGAGTC TGTAGTCAGT 
GTGGACAGTG ATGTGGAATG CTCCATGTCG TTCGCTATCG ATAACCAGCG TCTCGCCGTT 
TTAACCGGCG ATGCGGTCGT TACGGTGTCG CTCGAATGCC AGCGTTGCGG GAAACCGTTT 
ACCCATCAGG TTCACACAAC GTATTGTTTT AGCCCTGTCC GTTCCGACGA GCAGGCTGAA 
GCACTGCCGG AAGCGTATGA GCCGATTGAG GTAAACGAAT TCGGCGAAAT CGATCTGCTG 
GCGACGGTTG AAGATGAAAT CATCCTCGCC TTGCCGGTAG TTCCGGTGCA TGATTCTGAA 
CACTGTGAAG TGTCCGAGGC GGACATGGTC TTTGGCGAAC TGCCTGATGA AGCGCAAAAG 
CCAAACCCAT TTGCCGTATT AGCCAGCTTA AAGCGTAAGT AA
 
Protein sequence
MQKVKLPLTL DPVRTAQKRL DYQGIYTPDQ VERVAESVVS VDSDVECSMS FAIDNQRLAV 
LTGDAVVTVS LECQRCGKPF THQVHTTYCF SPVRSDEQAE ALPEAYEPIE VNEFGEIDLL 
ATVEDEIILA LPVVPVHDSE HCEVSEADMV FGELPDEAQK PNPFAVLASL KRK