| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1169 |
|---|
| Symbol | hpaH |
|---|
| ID | 6518411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 1151031 |
|---|
| End bp | 1151834 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642746294 |
|---|
| Product | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
|---|
| Protein accession | YP_002114103 |
|---|
| Protein GI | 194735094 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR02312] 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.135295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATA AACAGACCCA TACCCTGATC GCCCAGCGAC TTAATCAGGC TGAAAAACAG
CGTGAACAGA TTCGCGCAGT GTCGCTGGAT TATCCCAACA TCACTATTGA AGATGCCTAT
GCCGTACAGC GCGAATGGGT CAATATCAAA ATTGCCGAAG GGCGCACGCT CAAAGGCCAC
AAAATCGGCC TGACCTCAAA AGCGATGCAG GCCAGCTCGC AAATCAGCGA ACCGGATTAC
GGCGCGCTGC TTGACGATAT GTTCTTCCAT GACGGCGGCG ATATCCCCAC CGACCGTTTT
ATCGTCCCGC GTATTGAAGT GGAGCTGGCG TTCGTGCTGG CGAAACCGCT GCGCGGCCCT
CACTGCACGC TGTTCGACGT CTACAATGCC ACGGATTATG TGATTCCGGC GCTGGAACTG
ATTGACGCCC GCAGCCACAA CATCGACCCG GAAACCCAGC GCCCGCGCAA AGTGTTCGAC
ACCATTTCCG ACAACGCCGC CAACGCCGGG GTGATCCTCG GTGGTCGTCC CATCAAACCA
GACGAGCTGG ATCTGCGCTG GATCTCCGCG CTGCTCTATC GCAACGGCGT GATCGAAGAA
ACCGGCGTCG CCGCAGGTGT GCTGAATCAT CCGGCCAACG GCGTGGCGTG GCTGGCGAAC
AAGCTTGCCC CCTACGATGT CCAGCTTGAA GCCGGGCAGA TCATCCTCGG CGGCTCGTTC
ACCCGCCCGG TGCCGGCGCG CAAGGGCGAC ACTTTCCATG TCGATTACGG CAACATGGGC
GCGATCAGTT GCCGGTTTGT GTAA
|
|---|
| Protein sequence | MLDKQTHTLI AQRLNQAEKQ REQIRAVSLD YPNITIEDAY AVQREWVNIK IAEGRTLKGH
KIGLTSKAMQ ASSQISEPDY GALLDDMFFH DGGDIPTDRF IVPRIEVELA FVLAKPLRGP
HCTLFDVYNA TDYVIPALEL IDARSHNIDP ETQRPRKVFD TISDNAANAG VILGGRPIKP
DELDLRWISA LLYRNGVIEE TGVAAGVLNH PANGVAWLAN KLAPYDVQLE AGQIILGGSF
TRPVPARKGD TFHVDYGNMG AISCRFV
|
|---|
| |