Gene SeSA_A1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1148 
Symbol 
ID6518880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1133174 
End bp1133833 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content53% 
IMG OID642746274 
Producthypothetical protein 
Protein accessionYP_002114084 
Protein GI194734148 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.466231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.361481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTA TCATTACATC ATCGCGTGAT CGTAGCTCGC TACTGAGTAC GCACAAAGTA 
CTGCGCAACA CCTATTTTCT GTTGAGCCTG ACGCTGGCTT TCTCCGCAAT TACCGCGACA 
GCCAGTACGG TACTGATGCT GCCCTCCCCC GGCCTGATTC TGACGCTGGT CGGTATGTAT 
GGGCTGATGT TCCTGACCTA TAAAACCGCC AATAAGCCGG TCGGTATCCT GTCTGCTTTT 
GCGTTTACCG GCTTCCTCGG CTATATCCTG GGCCCGATTC TTAACGCCTA TCTGTCAGCA 
GGCATGGGCG ATGTCATTGG CCTGGCGCTG GGTGGTACCG CGTTAGTATT TTTCTGCTGC 
TCCGCTTACG TTCTGACCAC CCGTAAGGAT ATGTCTTTCC TGGGCGGTAT GTTAATGGCC 
GGGATCGTCG TCGTGCTGAT TGGTATGGTG GCGAATATTT TCCTGCAACT GCCTGCATTG 
CACCTGGCGA TTAGCGCGGT GTTTATCCTG ATTTCCTCGG GCGCTATCCT GTATGAAACC 
AGTAACATCA TTCACGGCGG TGAAACCAAC TATATTCGTG CGACCGTCAG TCTGTACGTT 
TCGCTGTACA ACATCTTTGT CAGCCTGCTC AGCATCCTGG GCTTCGCCAG CCGCGACTAA
 
Protein sequence
MDRIITSSRD RSSLLSTHKV LRNTYFLLSL TLAFSAITAT ASTVLMLPSP GLILTLVGMY 
GLMFLTYKTA NKPVGILSAF AFTGFLGYIL GPILNAYLSA GMGDVIGLAL GGTALVFFCC 
SAYVLTTRKD MSFLGGMLMA GIVVVLIGMV ANIFLQLPAL HLAISAVFIL ISSGAILYET 
SNIIHGGETN YIRATVSLYV SLYNIFVSLL SILGFASRD