Gene SeSA_A1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1145 
Symbol 
ID6518157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1131643 
End bp1132431 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content54% 
IMG OID642746271 
Productregulatory protein 
Protein accessionYP_002114081 
Protein GI194738333 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.103899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.251225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGAGA TGCATATTCG ACATCAGGAT CTTACGACGG CAGAGGTGCG TTCCAGTCAT 
CTGCACCGTT TGCATCGAGT TACGCTTTTT TCCGCCGCTA TCTGCCATAT TACGCAGGGC 
AGTAAAGTCA TCATTCAGGA TGATAGCCGC CTTGTCGCCG GGCCGGGCGA GTTGATTATT 
ATTCCGGCGA ACACGCCGCT GGAGATTATT AATCAGCCTG CGCAGAACGG TTTTCGCTCC 
GACCTGTTGT TACTTTCACC GGAGATTATT GCTCGCTTTA AAACGATGTA CGTTCAGGAT 
TATCCACCGG CAAACCTGAC ATCGCTGTGT ACCCCGATGA GCCGTAGCCT GACATTTATG 
TGGGAGAACG TGTTGGATGC TGTGCGCCAG GGTTTACCCG TTGGGCTACA GGAACATCAG 
GCGATGGGGT TACTGTTAGC GCTTTTACAT GATGGCGCGG CGGGACCGCT GCTTATTGAA 
CGGCGTTACA CCCTCACGGA GCAGGTGCGG CAACTGATTA TGCTCTCACC TGCTAAGCTA 
TGGACAGCCC AGGAGATAGC CCGCCGCCTT GCTATGGGAA CATCGACGCT GCGTCGACGT 
TTGCAGCGCG AATCGCAGAG TTATCGACAA ATTGTTGAAG AGGTGCGCAT GTCCTGCGCG 
CTTTCTCAAC TGCAATCGAC GACGCTGCCG ATCGGCGAAA TAGCGCTACG GTGCGGCTAC 
CTGTCGGGGT CGCGGTTTAC GGCCAGATTC CGCCAACATT ATGGGTGTCT CCCCAGCCAG 
GTACGTTAA
 
Protein sequence
MQEMHIRHQD LTTAEVRSSH LHRLHRVTLF SAAICHITQG SKVIIQDDSR LVAGPGELII 
IPANTPLEII NQPAQNGFRS DLLLLSPEII ARFKTMYVQD YPPANLTSLC TPMSRSLTFM 
WENVLDAVRQ GLPVGLQEHQ AMGLLLALLH DGAAGPLLIE RRYTLTEQVR QLIMLSPAKL 
WTAQEIARRL AMGTSTLRRR LQRESQSYRQ IVEEVRMSCA LSQLQSTTLP IGEIALRCGY 
LSGSRFTARF RQHYGCLPSQ VR