Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1136 |
Symbol | yccS |
ID | 6515657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1122580 |
End bp | 1124733 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642746263 |
Product | hypothetical membrane protein |
Protein accession | YP_002114073 |
Protein GI | 194734798 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01666] hypothetical membrane protein, TIGR01666 [TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.61616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.960871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGTC CGTTGATTCG CCGTTATACC TGGAACAGTA CCTGGCTGTA TTACATCCGC ATTTTTATCG CTCTGTGCGG CACCACCGCC CTGCCCTGGT GGCTGGGCGA CGTCAAACTG ACCATCCCGC TCACGCTCGG TATGGTTGCC GCGGCGCTAA CCGATCTCGA CGACCGCCTT GCCGGACGCT TGCGTAATTT AATCATTACC TTAATTTGCT TTTTTATCGC GTCGGCTTCT GTGGAGCTAC TCTTTCCCTG GCCGTGGCTA TTTGCGTTGG GCTTAACGTT ATCCACCAGC GGGTTTATTC TGTTGGGAGG ACTAGGGCAA CGCTATGCCA CCATCGCGTT CGGCGCGTTA CTCATTGCCA TCTACACGAT GCTGGGTACC CCTTTATACG ATCACTGGTA TCAGCAACCA CTGCTCCTGC TGGCAGGCGC AGTATGGTAT AACCTACTGA CGCTAACCGG GCATCTGCTA TTTCCGATCC GTCCGTTGCA GGATAATCTG GCACGCAGTT ACGAACAGTT AGCGCACTAT CTGGAACTGA AATCACGTCT GTTTGATCCT GATATTGAAG ATGAAAGCCA GGCGCCGCTC TATGATTTAG CGTTAGCGAA CGGGCAGTTA ATGGCGACGC TGAACCAAAC GAAAGTGTCG TTGTTGACTC GCCTGCGCGG CGATCGCGGT CAACGCGGTA CGCGCCGCAC CCTCCATTAC TATTTTGTGG CGCAGGATAT TCATGAACGC GCCAGTTCTT CGCATATTCA ATACCAGACG CTGCGCGATT ATTTTCGCCA TAGCGACGTC ATGTTCCGCT TTCAACGTCT GATGTCGATG CAGGCGCAGG CCTGTACGCA GCTGGCGCGC TGTATCTTAC TGCGTACGCC GTACCAGCAT GATCCGCGTT TTGAACGCGC CTTTACCCAC ATTGACGCCG CGCTTGAACG TATGCGCGCC AGCGGCGCTT CTTTAGAGCT GTTAAATACG CTTGGGTTCT TATTAACCAA CCTACGCGCC ATTGATGCGC AACTGGCGAC GATCGAGTCG GAGCAGGCCC AGGCAATGCC GCGCAATGAG TCAGAAAACC AGTTGGCTGA TGATAGCCTG CACGGGTTTA GCGACATCTG GCTGCGTCTG AGCCGTAATT TTACCCCGGA GTCCGCTCTC TTTCGCCATG CGGTACGCAT GTCGCTGGTA TTGTGCATCG GTTATGCTCT CATCCAAATT ACCGGGATGC GCCACGGGTA CTGGATATTG CTCACCAGCC TGTTCGTTTG CCAGCCTAAC TATAACGCGA CCCGCCATCG CCTTGCGCTC AGGATTATCG GTACGTTGGT AGGCGTTGCG ATCGGCCTGC CGATTTTATG GTTTGTCCCT TCGCTTGAAG GACAGTTAGT TCTGCTGGTG ATTACCGGCG TGCTTTTCTT CGCATTCCGT AATGTGCAGT ATGCCCATGC GACGATGTTC ATCACCCTGC TGGTATTACT CTGCTTTAAC CTCCTGGGCG AAGGCTTCGA GGTAGCGTTA CCGCGCGTCG TCGACACGTT AATTGGCTGC GCTATCGCCT GGGCTGCGGT CAGCTTTATT TGGCCGGACT GGCGCTTTCG CAACCTTCCC CGGGTACTCC AGCGCGCCAC CGATGCTAAT TGCCGCTACC TTGATGCGAT CCTTGAGCAA TATCACCAGG GACGGGATAA CCGCCTGACC TATCGCATTG CCAGACGCGA CGCGCACAAC CGCGATGCAG AACTGGCATC CGTGGTTTCT AATATGTCGA GCGAACCCGA CGTCACGGCC GAAACCCGGG AGGCGGCGTT CAGGCTGCTT TGCCTCAATC ACACTTTTAC CAGCTATATC TCCGCCCTCG GCGCGCACCG CGAAAAGCTC AGTAATCCGG ACGTGTTGGG GCTTCTGGAT GACGCGGTCT GCTACGTTGA TGATGCGCTT CATCATCAAC CTGAAGACGA ACAGCGCGTA CACCAGGCGC TGGAGGGTTT AAAGCAGCGA GTTCAGTCGC TGGAAACACG TCCGGACAGC AAAGAACCTC TGGTTGTTCA ACAAATTGGT TTGCTCATTG CCTTACTGCC CGAGATTGGA CGCTTGCAAC GGCAAATTTC ACCGCCGACT TCTACATTAA TTACCCAGCC GTAA
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Protein sequence | MLSPLIRRYT WNSTWLYYIR IFIALCGTTA LPWWLGDVKL TIPLTLGMVA AALTDLDDRL AGRLRNLIIT LICFFIASAS VELLFPWPWL FALGLTLSTS GFILLGGLGQ RYATIAFGAL LIAIYTMLGT PLYDHWYQQP LLLLAGAVWY NLLTLTGHLL FPIRPLQDNL ARSYEQLAHY LELKSRLFDP DIEDESQAPL YDLALANGQL MATLNQTKVS LLTRLRGDRG QRGTRRTLHY YFVAQDIHER ASSSHIQYQT LRDYFRHSDV MFRFQRLMSM QAQACTQLAR CILLRTPYQH DPRFERAFTH IDAALERMRA SGASLELLNT LGFLLTNLRA IDAQLATIES EQAQAMPRNE SENQLADDSL HGFSDIWLRL SRNFTPESAL FRHAVRMSLV LCIGYALIQI TGMRHGYWIL LTSLFVCQPN YNATRHRLAL RIIGTLVGVA IGLPILWFVP SLEGQLVLLV ITGVLFFAFR NVQYAHATMF ITLLVLLCFN LLGEGFEVAL PRVVDTLIGC AIAWAAVSFI WPDWRFRNLP RVLQRATDAN CRYLDAILEQ YHQGRDNRLT YRIARRDAHN RDAELASVVS NMSSEPDVTA ETREAAFRLL CLNHTFTSYI SALGAHREKL SNPDVLGLLD DAVCYVDDAL HHQPEDEQRV HQALEGLKQR VQSLETRPDS KEPLVVQQIG LLIALLPEIG RLQRQISPPT STLITQP
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