| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1120 |
|---|
| Symbol | pyrD |
|---|
| ID | 6517062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 1105849 |
|---|
| End bp | 1106859 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642746248 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_002114058 |
|---|
| Protein GI | 194737217 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00333644 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTATC CCTTCGTTCG TAAAGCCCTT TTCCAGCTCG ATCCAGAGCG CGCTCATGAA
TTTACATTTC AACAATTACG CCGCATTACA GGTACGCCGC TGGAAGCGCT GGTGCGCCAG
AAAGTACCGA CAAAGCCGGT TACCTGCATG GGACTTACCT TTAAAAATCC ACTGGGGCTG
GCTGCCGGTC TGGATAAAGA CGGGGAGTGC ATCGACGCGT TAGGCGCGAT GGGGTTTGGC
TCCCTGGAAA TCGGCACCGT GACGCCGCGC CCACAGCCGG GTAACGATAA GCCGCGTCTT
TTTCGTCTGG TGGATGCTGA AGGTCTGATC AATCGGATGG GCTTTAATAA TCTGGGCGTC
GATAACCTGG TCGAGAATGT TAAAAAAGCC CATTTTGATG GTATTCTGGG AATTAACATC
GGTAAAAATA AAGATACGCC TGTCGAAAAT GGCAAAGATG ACTACCTGAT TTGTATGGAA
AAAGTCTATG CTTATGCGGG TTATATCGCC ATTAATATTT CTTCGCCGAA TACGCCAGGG
CTACGTACGC TCCAGTATGG CGATGCGCTG GACGATCTGT TAACTGCCAT TAAAAATAAG
CAAAACGATC TTCAGGCGAT CCACCATAAA TATGTGCCGG TGGCAGTAAA GATCGCGCCG
GATCTTTGTG AAGAAGAATT GATCCAGGTT GCCGATAGCC TGCTTCGTCA TAATATTGAT
GGGGTGATTG CGACAAATAC CACCCTCGAT CGTTCTCTGG TACAAGGAAT GAAAAATTGC
CAGCAAACGG GGGGATTAAG TGGCCGGCCA TTACAATTAA AAAGCACAGA AATTATTCGC
CGTTTATCCC AGGAGTTAAA AGGACAATTG CCTATTATCG GCGTCGGCGG CATTGACTCA
GTTATCGCCG CGCGCGAGAA GATAGCGGCA GGAGCTACGC TGGTACAAAT TTATTCCGGC
TTTATTTTTA AAGGCCCGCC ATTGATTAAA GAAATCGTAA CGCACATCTA A
|
|---|
| Protein sequence | MYYPFVRKAL FQLDPERAHE FTFQQLRRIT GTPLEALVRQ KVPTKPVTCM GLTFKNPLGL
AAGLDKDGEC IDALGAMGFG SLEIGTVTPR PQPGNDKPRL FRLVDAEGLI NRMGFNNLGV
DNLVENVKKA HFDGILGINI GKNKDTPVEN GKDDYLICME KVYAYAGYIA INISSPNTPG
LRTLQYGDAL DDLLTAIKNK QNDLQAIHHK YVPVAVKIAP DLCEEELIQV ADSLLRHNID
GVIATNTTLD RSLVQGMKNC QQTGGLSGRP LQLKSTEIIR RLSQELKGQL PIIGVGGIDS
VIAAREKIAA GATLVQIYSG FIFKGPPLIK EIVTHI
|
|---|
| |