| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1052 |
|---|
| Symbol | poxB |
|---|
| ID | 6518888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 1020509 |
|---|
| End bp | 1022227 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642746180 |
|---|
| Product | pyruvate dehydrogenase |
|---|
| Protein accession | YP_002113991 |
|---|
| Protein GI | 194737868 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA CCGTTGCTGC TTTTATCGCC AAAACGCTGG AACAGGCTGG CGTAAAACGA
ATCTGGGGCG TCACTGGCGA CTCCCTGAAC GGCCTGAGCG ATAGTCTTAA TCGTATGGGA
ACCATTGAAT GGATGCCAAC CCGCCACGAA GAGGTCGCCG CTTTCGCCGC CGGCGCACAA
GCGCAGCTTA CCGGCGAGCT GGCAGTGTGC GCCGGTTCAT GTGGACCGGG CAACCTGCAC
CTGATCAATG GCCTGTTTGA TTGCCACCGT AACCACGTCC CTGTTCTGGC GATCGCCGCC
CATATTCCGT CCAGTGAAAT CGGTAGCGGT TATTTCCAGG AGACCCACCC GCAGGAGTTG
TTCCGTGAAT GCAGCCACTA TTGCGAGTTG GTTTCCAGCC CGGAGCAGAT CCCGCAGGTA
CTCGCCATCG CCATGCGCAA AGCGGTGCTA AATCGCGGCG TCTCCGTGGT CGTACTTCCG
GGTGACGTAG CGCTGAAACC CGCGCCTGAA AACGCCGTCA CTCATTGGTA CCATGCCCCG
CACCCCGTCG TCACGCCGGC GGAGGAAGAG CTGAAAAAAC TGGCGCAACT GCTGCGCTAC
TCCAGCAATA TCGCATTGAT GTGCGGTAGC GGCTGCGCGG GCGCGCATGA GGAGTTGGTC
GCGTTGGCGG CAAAACTAAA AGCGCCAATC GTTCATGCCC TGCGCGGCAA AGAGCACGTT
GAGTACGATA ACCCTTATGA TGTGGGAATG ACCGGCCTGA TTGGCTTTTC TTCTGGCTTC
CACACCATGA TGAACGCCGA TACGCTGATC CTGCTCGGCA CCCAGTTCCC CTACCGCGCC
TTTTATCCGA GCGATGCCAA AATCATTCAG ATTGACATCA ACCCGGGTAG TATTGGCGCA
CACAGCAAAG TCGACATGGC GCTGGTGGGC GATATTAAAG CCACGCTTCG CGCCCTGCTG
CCGCTGGTGG AAGAAAAAAG CAATCGTAAA TTCCTCGATA AAGCTCTGGA GCACTATCGG
GACGCCCGTA AGGGACTTGA TGACTTAGCC AAACTCAGCG ACAAAGCCAT CCATCCGCAA
TATCTGGCGC AACAAATTAG TCATTTCGCC GCTGACGACG CTATTTTTAC CTGCGATGTC
GGCACGCCGA CCGTCTGGGC GGCCCGCTAT CTAAAAATGA ACGGCAAGCG CCGCTTGCTG
GGCTCGTTTA ACCACGGGTC AATGGCCAAC GCGATGCCGC AGGCGCTCGG CGCTCAGGCC
ACCGCGCCTG GTCGTCAGGT TATCGCGATG TGCGGTGATG GCGGCTTCAG TATGCTGATG
GGCGATTTTC TCTCGGTGGT ACAGATGAAG CTGCCGATAA AAATCGTCGT CTTTAATAAC
AGCGTGCTGG GCTTTGTGGC GATGGAAATG AAAGCCGGCG GCTACCTTAC CGACGGTACC
GAACTGCACG ACACCAATTT CGCGCGGATC GCCGAAGCCT GCGGCATTAC CGGTATTTGC
GTGGAAAAAG CCGCAGACGT GGACGGAGCG CTACAGCGCG CGTTTTCCAT TGACGGCCCG
GTACTGGTTG ACGTGGTCGT GGCAAAAGAA GAGCTGGCGA TCCCGCCGCA GATCAAACTG
GAACAAGCGA AAGGCTTTAG CCTGTACATG CTACGCGCCA TTATTAGCGG CCGCGGCGAT
GAAGTGATCG AACTGGCGAA AACGAACTGG CTAAGGTAA
|
|---|
| Protein sequence | MKQTVAAFIA KTLEQAGVKR IWGVTGDSLN GLSDSLNRMG TIEWMPTRHE EVAAFAAGAQ
AQLTGELAVC AGSCGPGNLH LINGLFDCHR NHVPVLAIAA HIPSSEIGSG YFQETHPQEL
FRECSHYCEL VSSPEQIPQV LAIAMRKAVL NRGVSVVVLP GDVALKPAPE NAVTHWYHAP
HPVVTPAEEE LKKLAQLLRY SSNIALMCGS GCAGAHEELV ALAAKLKAPI VHALRGKEHV
EYDNPYDVGM TGLIGFSSGF HTMMNADTLI LLGTQFPYRA FYPSDAKIIQ IDINPGSIGA
HSKVDMALVG DIKATLRALL PLVEEKSNRK FLDKALEHYR DARKGLDDLA KLSDKAIHPQ
YLAQQISHFA ADDAIFTCDV GTPTVWAARY LKMNGKRRLL GSFNHGSMAN AMPQALGAQA
TAPGRQVIAM CGDGGFSMLM GDFLSVVQMK LPIKIVVFNN SVLGFVAMEM KAGGYLTDGT
ELHDTNFARI AEACGITGIC VEKAADVDGA LQRAFSIDGP VLVDVVVAKE ELAIPPQIKL
EQAKGFSLYM LRAIISGRGD EVIELAKTNW LR
|
|---|
| |