Gene SeSA_A1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1048 
Symbol 
ID6518895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1016089 
End bp1016919 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content57% 
IMG OID642746176 
ProductN-acetylmuramoyl-L-alanine amidase AmiD 
Protein accessionYP_002113987 
Protein GI194736394 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCGC TACTGTGGCT GGTGGGTCTC GCGTTGCTGT TAACAGGCTG CGCGAGCGAA 
AAAGGAATTA TCGATAAAGA GGGATATCAG CTTGATACCC GACATCGGGC GCAGGCGGCC 
TATCCGCGCA TTAAAGTTCT GGTGATTCAC TATACGGCGG AAAACTTTGA CGTTTCGCTG 
GCGACGTTAA CGGGTCGCAA CGTCAGTTCG CATTACCTGA TTCCCGCAAC CCCTCCATTA 
TATGGCGGTA AACCGCGCAT CTGGCAACTG GTGCCGGAAC AGGATCAGGC CTGGCATGCG 
GGCGTCAGTT TCTGGCGAGG CGCCACGCGT CTCAATGATA CGTCTATTGG CATTGAGCTG 
GAAAATCGCG GCTGGCGAAT GTCCGGCGGG GTGAAATCTT TCGCGCCGTT TGAATCCGCG 
CAAATTCAGG CATTGATTCC GTTAGCGAAG GACATTATCG CGCGCTATGA CATCAAACCG 
CAGAATGTGG TGGCCCATGC GGATATCGCG CCGCAGCGTA AAGACGATCC CGGCCCGCGC 
TTCCCGTGGC GCGAGCTGGC GGCGCAGGGG ATTGGCGCCT GGCCTGACGC CCAGCGTGTG 
GCGTTTTATC TGGCTGGACG CGCGCCGTAT ACGCCAGTCG ATACCGCAAC GGTGCTTGCG 
TTACTCTCGC GCTATGGTTA TGAAGTCAAA GCCGATATGA CGGCACGCGA GCAGCAGCGG 
GTGATTATGG CGTTCCAGAT GCACTTCCGT CCGGCGCAAT GGAACGGTAT CGCAGATGCC 
GAAACGCAGG CGATTGCCGA AGCATTACTG GAGAAGTACG GCCAGGATTA A
 
Protein sequence
MRALLWLVGL ALLLTGCASE KGIIDKEGYQ LDTRHRAQAA YPRIKVLVIH YTAENFDVSL 
ATLTGRNVSS HYLIPATPPL YGGKPRIWQL VPEQDQAWHA GVSFWRGATR LNDTSIGIEL 
ENRGWRMSGG VKSFAPFESA QIQALIPLAK DIIARYDIKP QNVVAHADIA PQRKDDPGPR 
FPWRELAAQG IGAWPDAQRV AFYLAGRAPY TPVDTATVLA LLSRYGYEVK ADMTAREQQR 
VIMAFQMHFR PAQWNGIADA ETQAIAEALL EKYGQD