Gene SeSA_A0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0977 
SymbolglnP 
ID6518682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp950772 
End bp951431 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content53% 
IMG OID642746109 
Productglutamine ABC transporter permease protein 
Protein accessionYP_002113920 
Protein GI194737623 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.034777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTG ACTGGAGCGC CATCTGGCCC GCCATTCCGC TTTTGCTTGA GGGCGCTAAA 
ATGACCCTGT GGATCTCGGT CCTCGGTCTG GCTGGCGGCC TGGTTATTGG ACTGGCGGCA
GGTTTTGCCC GTACGTTTGG CGGCTGGTTC GCCAACCACA TCGCCCTGGT TTTCATTGAA
ATTATTCGCG GCACGCCCAT CGTTGTCCAG GTCATGTTTA TCTACTTTGC CCTGCCGATG
GCATTTAATG ATTTGCGTAT TGATCCGTTC AGCGCAGCGG TCGTGACAAT TATGATTAAC
TCCGGCGCTT ATATCGCGGA AATTACTCGC GGCGCAGTAC TATCCATTCA CAAAGGTTTT
CGCGAAGCGG GTCTGGCGCT GGGCCTTTCT CGCCGGGAAA CCATCCGCCA TGTTATTTTA
CCGCTTGCTC TGCGCCGTAT GCTGCCGCCG CTGGGCAACC AGTGGATCAT TAGCATCAAA
GACACCTCGT TGTTTATTGT TATCGGCGTA GCCGAGCTGA CCCGTCAGGG CCAGGAAATT
ATTGCCGGTA ACTTTCGCGC CCTGGAAATC TGGAGCGCCG TGGCCGTCTT CTATTTGATC
ATTACGCTGG TGCTGAGCTT TATTTTGCGT CGTCTTGAAA GAAGGATGAA AATCCTGTGA
 
Protein sequence
MQFDWSAIWP AIPLLLEGAK MTLWISVLGL AGGLVIGLAA GFARTFGGWF ANHIALVFIE 
IIRGTPIVVQ VMFIYFALPM AFNDLRIDPF SAAVVTIMIN SGAYIAEITR GAVLSIHKGF
REAGLALGLS RRETIRHVIL PLALRRMLPP LGNQWIISIK DTSLFIVIGV AELTRQGQEI
IAGNFRALEI WSAVAVFYLI ITLVLSFILR RLERRMKIL