Gene SeSA_A0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0963 
Symbol 
ID6516782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp934943 
End bp936049 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content52% 
IMG OID642746095 
ProductABC-2 type transporter permease 
Protein accessionYP_002113906 
Protein GI194736055 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCATC GCTTATGGAC ATTAATTCGC AAAGAACTGC AATCGCTTTT ACGCGAACCG 
CAAACGCGCG CGATCCTGAT TCTGCCGGTG CTGATTCAGG TCATCCTGTT TCCATTCGCC
GCGACGCTTG AAGTCACTAA CGCGACTATC GCTATCTACA ACGAAGATAA CGGCAAACAT
TCGGTAGAAC TTACCCAGCG CTTTGCCCGC GCGAAAGCGT TTACCCATGT GCTATTGCTG
AACAGTCCGC AGGAGATCCA GCCGACTATC GATACGCAAA AAGCGCTGCT GCTGGTACGC
TTCCCGGCGG ATTTCTCGCG GAATCTGGAT ACCTTCCAGC CAGCGCCGAT GCAACTCATT
CTTGATGGAC GTAACTCCAA CAGCGCGCAA ATCGCCGCCA ATTATCTGCA ACAGATCGTC
AAGGAGTATC AGCAGACATT GATGGACGGC AAGCCAAAGC CCAACAATAG CGAACTGGTG
GTACGCAACT GGTATAATCC GAATCTGGAC TACAAGTGGT TTGTGGTGCC CTCGCTGATC
GCCATGATCA CCACTATCGG CGTGATGATC GTGACTTCGC TGTCCGTCGC CCGCGAGCGT
GAACAAGGCA CTCTGGATCA GCTACTGGTC TCTCCGCTCA CCACCTGGCA GATTTTCGTT
GGTAAAGCGG TGCCGGCGCT GATAGTCGCG ACCTTCCAGG CCACGATCGT GCTGGCTATC
GGCATTTGGG CATACCAAAT TCCCTTCGCC GGTTCGTTAG CGCTGTTTTA TTTCACGATG
GTGATTTACG GGCTGTCGCT GGTAGGCTTT GGCTTACTGA TATCATCGCT TTGCGCCACG
CAACAGCAGG CGTTTATCGG CGTTTTTGTC TTTATGATGC CAGCGATTTT GCTCTCGGGG
TATGTCTCGC CAGTGGAAAA TATGCCGGTC TGGCTGCAAA ACCTGACGTG GATAAACCCT
ATCCGCCACT TTACTGATAT TACCAAGCAA ATTTATCTTA AGGATGCGAG TCTGGGGATT
GTCTGGGGAA GTTTGTGGCC GCTACTGGTG ATAGCGGCCA CCACGGGTTC AGCGGCGTAT
GCGATGTTTA GACGCAAAGT GATGTAG
 
Protein sequence
MFHRLWTLIR KELQSLLREP QTRAILILPV LIQVILFPFA ATLEVTNATI AIYNEDNGKH 
SVELTQRFAR AKAFTHVLLL NSPQEIQPTI DTQKALLLVR FPADFSRNLD TFQPAPMQLI
LDGRNSNSAQ IAANYLQQIV KEYQQTLMDG KPKPNNSELV VRNWYNPNLD YKWFVVPSLI
AMITTIGVMI VTSLSVARER EQGTLDQLLV SPLTTWQIFV GKAVPALIVA TFQATIVLAI
GIWAYQIPFA GSLALFYFTM VIYGLSLVGF GLLISSLCAT QQQAFIGVFV FMMPAILLSG
YVSPVENMPV WLQNLTWINP IRHFTDITKQ IYLKDASLGI VWGSLWPLLV IAATTGSAAY
AMFRRKVM