Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0898 |
Symbol | cydA |
ID | 6518842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 875277 |
End bp | 876845 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642746032 |
Product | cytochrome d ubiquinol oxidase subunit I |
Protein accession | YP_002113848 |
Protein GI | 194734913 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.346957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGATA TAGTCGAACT GTCGCGCTTA CAGTTTGCCT TGACCGCGAT GTACCACTTC CTGTTTGTGC CGCTAACGCT CGGTATGGCG TTCCTGCTGG CCATTATGGA AACGGTATAC GTCCTTTCCG GCAAACAGAT TTATAAAGAT ATGACCAAGT TCTGGGGCAA GTTGTTTGGT ATCAACTTTG CTCTGGGTGT GGCTACCGGT TTGACCATGG AGTTCCAGTT CGGGACAAAC TGGTCGTACT ACTCCCACTA TGTTGGGGAC ATCTTCGGTG CGCCGCTGGC CATCGAAGGT TTGATGGCCT TCTTCCTCGA ATCCACCTTT GTAGGTCTGT TCTTCTTCGG CTGGGATCGT CTGAGTAAAG TTCAGCATAT GTGCGTCACC TGGCTGGTGG CTCTGGGGTC CAACCTCTCC GCGTTGTGGA TTCTGGTAGC GAACGGCTGG ATGCAAAACC CAATCGCTGC GGATTTCAAT TTCGAAACCA TGCGTATGGA AATGGTGAGC TTCTCTGAAC TGGTGCTGAA CCCGGTAGCA CAGGTGAAAT TTGTTCACAC TGTGGCGTCC GGCTATGTCA CCGGCGCGAT GTTCATCCTC GGTATCAGCG CTTACTACAT GCTGAAAGGT CGTGACTTCG CCTTTGCTAA ACGCTCCTTT GCTATTGCCG CCAGCTTCGG TATGGCTGCC GTACTGTCCG TTATCGTACT CGGCGACGAA TCCGGTTACG AAATGGGCGA CGTGCAGAAA ACCAAGCTCG CTGCGATTGA AGCTGAATGG GAAACGCAAC CTGCTCCGGC CTCCTTTACC TTGTTCGGTA TTCCTGACCA GGACAAACAG GAAAACCATC TGGCGATTCA GATCCCTTAT GCGCTCGGTA TTATCGCTAC GCGTTCCGTG GACACGCCGG TTATTGGCCT GAAAGATCTC ATGGTTCAGC ATGAAGAGCG TATCCGTAAC GGGATGAAAG CCTATGAACT GCTGGAACAG CTGCGCGCCG GTTCTACCGA CCAGGCCGTT CGCGACCAGT TCAACAGCAT GAAGAAAGAT CTCGGTTACG GCCTGCTGCT GAAACGCTAT ACGCCTAATG TGACTGACGC GACCGAAGCG CAGATCCAGC AAGCGACGAA AGATTCCATT CCTCGCGTTG CGCCGCTGTA CTTCGCTTTC CGTATCATGG TGGCGTGCGG CTTCCTGCTG CTGGCGATCA TCGCACTTTC CTTCTGGAGC GTGATTCGTA ACCGCATCGG TGAGAAAAAA TGGCTGTTGC GCGCGGCGCT GTACGGTATT CCACTGCCGT GGATTGCGGT TGAAGCAGGT TGGTTCGTCG CCGAGTATGG TCGTCAGCCG TGGGCGATCG GCGAAGTGTT GCCGACAGCC GTGGCGAACT CATCGCTGAC CGTGGGCGAT CTGCTGTTCT CCATGTTCCT GATTTGCGGC CTCTATACCC TGTTCCTGGT GGCAGAATTG TTCCTGATGT TCAAATTTGC ACGCCTTGGC CCAAGCAGCC TGAAAACCGG TCGCTATCAC TTTGAGCAGT CCACCGTGAC TTCTCAGCCG GCACGCTAA
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Protein sequence | MLDIVELSRL QFALTAMYHF LFVPLTLGMA FLLAIMETVY VLSGKQIYKD MTKFWGKLFG INFALGVATG LTMEFQFGTN WSYYSHYVGD IFGAPLAIEG LMAFFLESTF VGLFFFGWDR LSKVQHMCVT WLVALGSNLS ALWILVANGW MQNPIAADFN FETMRMEMVS FSELVLNPVA QVKFVHTVAS GYVTGAMFIL GISAYYMLKG RDFAFAKRSF AIAASFGMAA VLSVIVLGDE SGYEMGDVQK TKLAAIEAEW ETQPAPASFT LFGIPDQDKQ ENHLAIQIPY ALGIIATRSV DTPVIGLKDL MVQHEERIRN GMKAYELLEQ LRAGSTDQAV RDQFNSMKKD LGYGLLLKRY TPNVTDATEA QIQQATKDSI PRVAPLYFAF RIMVACGFLL LAIIALSFWS VIRNRIGEKK WLLRAALYGI PLPWIAVEAG WFVAEYGRQP WAIGEVLPTA VANSSLTVGD LLFSMFLICG LYTLFLVAEL FLMFKFARLG PSSLKTGRYH FEQSTVTSQP AR
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