| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0888 |
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| Symbol | sdhC |
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| ID | 6519846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 863726 |
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| End bp | 864130 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642746022 |
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| Product | succinate dehydrogenase cytochrome b556 large membrane subunit |
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| Protein accession | YP_002113838 |
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| Protein GI | 194737993 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
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| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.171127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.76264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGGCGT TATTCATGAT AAGAAATGTG AAAAAACAAA GACCTGTCAA TCTGGATCTA
CAAACGATTC GGTTCCCCAT CACAGCGATA GCGTCCATTC TCCATCGCGT ATCCGGTGTG
ATTACTTTCA TCGCAGTCGG CATACTACTG TGGCTACTGG GCACCAGCCT CTCTTCTCCG
GAAGGATTCC AGCAGGCCGC CGACATTATG GACGGCTTCA TCGTTAAATT TATCATGTGG
GGCATCCTTA CCGCGCTGGC GTATCACGTC ATCGTGGGAA TTCGTCACAT GTTAATGGAT
TTTGGCTATC TGGAAGAAAC ATTCGAAGCG GGTCAACGCT CTGCCAAAAT CTCTTTTGTT
ATCACTGTCG TGCTTTCACT TCTCGCAGGA GTCCTCGTAT GGTAA
|
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| Protein sequence | MWALFMIRNV KKQRPVNLDL QTIRFPITAI ASILHRVSGV ITFIAVGILL WLLGTSLSSP
EGFQQAADIM DGFIVKFIMW GILTALAYHV IVGIRHMLMD FGYLEETFEA GQRSAKISFV
ITVVLSLLAG VLVW
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