Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0860 |
Symbol | |
ID | 6518853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 832106 |
End bp | 832783 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642745994 |
Product | DNA-binding transcriptional activator KdpE |
Protein accession | YP_002113810 |
Protein GI | 194734914 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACAAACG TTCTGATTGT TGAAGATGAA CAGGCCATCC GCCGCTTTCT GCGCGCTGCG CTGGAAGGCG ACGGCCTGCG CGTGTATGAA GCTGAAACAT TACAACGTGG TTTACTGGAA GCCGCCACGC GAAAGCCCGA TCTGATTATT CTCGATCTCG GCCTGCCGGA CGGCGATGGA ATCGATTTTA TTCGCGACCT GCGTCAGTGG AGCGCAATAC CGGTGATTGT CCTTTCCGCC CGCAGCGAAG AAAGCGATAA GATTGCCGCG CTTGACGCCG GAGCTGATGA TTACCTGAGC AAGCCATTCG GCATTGGCGA GTTGCAGGCG CGTTTGCGTG TCGCGCTGCG ACGGCACGCC GCCAGCCCTT GCGCCGATCC GATCGTCCGC TTTTCCGGCG TGACGGTCGA TCTCGCCGCA CGGTTGATCC ACCGTGGCGA CGAAGAAATC CATCTGACGC CGATTGAGTT CCGCCTGCTG GCGGTATTAC TCAATAATGC CGGCAAGGTA TTAACCCAAC GGCAGTTATT AAACCAGGTC TGGGGCCCTA ACGCCGTGGA GCATAGCCAC TATTTGCGCA TCTATATGGG ACATTTACGC CAGAAACTGG AACAAGATCC CACCCGCCCA CGCCATTTTA TTACCGAAAC CGGAATTGGC TATCGCTTTA TGCCGTGA
|
Protein sequence | MTNVLIVEDE QAIRRFLRAA LEGDGLRVYE AETLQRGLLE AATRKPDLII LDLGLPDGDG IDFIRDLRQW SAIPVIVLSA RSEESDKIAA LDAGADDYLS KPFGIGELQA RLRVALRRHA ASPCADPIVR FSGVTVDLAA RLIHRGDEEI HLTPIEFRLL AVLLNNAGKV LTQRQLLNQV WGPNAVEHSH YLRIYMGHLR QKLEQDPTRP RHFITETGIG YRFMP
|
| |