| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0804 |
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| Symbol | cobD |
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| ID | 6519705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 779090 |
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| End bp | 780184 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642745939 |
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| Product | threonine-phosphate decarboxylase |
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| Protein accession | YP_002113762 |
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| Protein GI | 194737165 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0706087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAT TCAACAGCGC GCATGGCGGT AATATTCGGG AAGCCGCGAC GGTGTTGGGC
ATCTCGCCTG ACCAGTTACT GGATTTTAGC GCAAATATTA ATCCGCTGGG TATGCCTGTC
AGCGTGAAAC GCGCGCTTAT CGACAATCTG GACTGCATTG AGCGCTACCC GGACGCCGAT
TATTTTCATT TGCACCAGGC GCTGGCGCGT CATCACCAGG TGCCGGCATC GTGGATACTG
GCGGGAAATG GCGAGACGGA GTCAATCTTT ACCGTGGCGA GCGGTCTTAA ACCGCGTCGT
GCAATGATTG TCACGCCAGG TTTCGCGGAG TATGGCCGGG CGCTGGCGCA AATTGGCTGT
GAAATTCGTC GCTGGTCTCT ACGCGAAGCG GATGGCTGGC AGCTTACCGA TGCCATTCTT
GAGGCGTTGA CGCCCGATCT GGACTGCCTG TTTCTGTGTA CGCCCAATAA TCCTACCGGC
CTGCTGCCGG AGCGGCCGTT ATTACAGGCC ATTGCCGATC GCTGCAAATC GCTGAGCATT
AACCTGATCC TGGATGAGGC GTTTATCGAT TTTATTCCGC ATGAGACGGG CTTTATTCCT
GCTCTTAAAG ATAATCCGCA TATCTGGGTG CTGCGTTCGC TGACCAAATT TTATGCCATT
CCCGGCCTGC GGTTGGGATA TCTCGTCAAT AGCGATGACG CGGCGGTAGC GCGGATGCGT
CGCCAACAAA TGCCGTGGTC GATTAACGCG CTGGCGGCGC TGGCCGGTGA GGTAGCGTTA
CAGGATAGCG CCTGGCAACA GGCGACCTGG CATTGGTTAC GGGAGGAGGG CGCCCGGTTT
TATCAGGCGC TTTGTCAGCT CCCCCTGCTG ACGGTCTATC CCGGGCGGGC AAACTATCTG
TTGTTACGCT GTGAGCGAGA GGATATTGAT CTGCAGCGAC GGTTGCTGAC GCAGCGGATT
TTAATCCGTA GCTGCGCTAA CTACCCGGGG CTGGACAGCC GCTATTATCG TGTGGCGATA
CGCAGCGCTG CGCAAAACGA GCGTCTGCTG TCGGCGCTGC GCAATGTGCT TACCGGTATA
GCCCCTGCTG ATTGA
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| Protein sequence | MALFNSAHGG NIREAATVLG ISPDQLLDFS ANINPLGMPV SVKRALIDNL DCIERYPDAD
YFHLHQALAR HHQVPASWIL AGNGETESIF TVASGLKPRR AMIVTPGFAE YGRALAQIGC
EIRRWSLREA DGWQLTDAIL EALTPDLDCL FLCTPNNPTG LLPERPLLQA IADRCKSLSI
NLILDEAFID FIPHETGFIP ALKDNPHIWV LRSLTKFYAI PGLRLGYLVN SDDAAVARMR
RQQMPWSINA LAALAGEVAL QDSAWQQATW HWLREEGARF YQALCQLPLL TVYPGRANYL
LLRCEREDID LQRRLLTQRI LIRSCANYPG LDSRYYRVAI RSAAQNERLL SALRNVLTGI
APAD
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