| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0421 |
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| Symbol | prpC |
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| ID | 6519541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 431759 |
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| End bp | 432928 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642745573 |
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| Product | methylcitrate synthase |
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| Protein accession | YP_002113397 |
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| Protein GI | 194737491 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0258062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CCACGATCCT GCAAAATAAT AACCATGTCA TTAAGCCCAA AAAATCCGTC
GCCTTGTCTG GCGTACCAGC CGGAAATACC GCTCTGTGTA CCGTGGGAAA AAGCGGTAAC
GATCTGCACT ATCGCGGTTA CGACATTCTC GATCTGGCGG AGCATTGCGA ATTTGAAGAA
GTCGCGCATT TGCTGATCCA CGGAAAATTA CCGACCCGCG ACGAGCTGAA CGCTTATAAA
AGCAAGTTAA AAGCGCTGCG CGGATTACCC GCCAATGTCC GTACCGTTCT GGAAGCGTTA
CCGGCGGCCT CGCACCCGAT GGACGTGATG CGTACCGGCG TTTCCGCGCT GGGCTGCACC
CTGCCGGAAA AAGAGGGACA TACCGTCTCC GGCGCGCGCG ATATTGCCGA TAAGCTGTTG
GCCTCGCTCA GCTCTATCCT TCTTTACTGG TATCACTACA GTCACAACGG CGAACGTATT
CAGCCGGAAA CCGACGATGA TTCCATCGGC GGCCATTTCC TGCATCTGCT GCATGGTGAA
AAGCCAACCC AAAGCTGGGA AAAGGCGATG CATATTTCGC TGGTGCTGTA TGCCGAGCAT
GAGTTCAACG CCTCGACGTT TACCAGCCGG GTGATTGCCG GGACCGGCTC GGATGTCTAC
TCCGCGATTA TCGGCGCGAT TGGCGCGCTG CGGGGCCCGA AACACGGCGG GGCGAATGAG
GTGTCGCTGG AAATTCAACA GCGTTATGAA ACGCCGGACG AGGCAGAGGC GGATATCCGT
AAACGCGTGG AAAACAAAGA GGTGGTGATT GGCTTTGGAC ATCCGGTTTA CACCATCGCC
GACCCGCGCC ATCAGGTGAT CAAACGGGTG GCGAAACAGC TTTCAGAAGA AGGCGGCTCG
CTGAAGATGT ACCACATCGC CGACCGTCTG GAAACGGTGA TGTGGGAAAC CAAAAAGATG
TTCCCGAATC TCGACTGGTT TTCGGCGGTC TCCTACAACA TGATGGGCGT CCCTACCGAA
ATGTTCACCC CGCTGTTTGT CATCGCCCGC GTTACCGGCT GGGCGGCGCA CATTATTGAA
CAGCGTCAGG ACAACAAGAT TATTCGCCCC TCTGCCAACT ATACCGGGCC GGAAGATCGT
CCGTTTGTCT CGATAGACGA TCGTTGCTAA
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| Protein sequence | MSDTTILQNN NHVIKPKKSV ALSGVPAGNT ALCTVGKSGN DLHYRGYDIL DLAEHCEFEE
VAHLLIHGKL PTRDELNAYK SKLKALRGLP ANVRTVLEAL PAASHPMDVM RTGVSALGCT
LPEKEGHTVS GARDIADKLL ASLSSILLYW YHYSHNGERI QPETDDDSIG GHFLHLLHGE
KPTQSWEKAM HISLVLYAEH EFNASTFTSR VIAGTGSDVY SAIIGAIGAL RGPKHGGANE
VSLEIQQRYE TPDEAEADIR KRVENKEVVI GFGHPVYTIA DPRHQVIKRV AKQLSEEGGS
LKMYHIADRL ETVMWETKKM FPNLDWFSAV SYNMMGVPTE MFTPLFVIAR VTGWAAHIIE
QRQDNKIIRP SANYTGPEDR PFVSIDDRC
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