Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0392 |
Symbol | |
ID | 6519270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 396350 |
End bp | 397279 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642745544 |
Product | fimbrial chaperone protein |
Protein accession | YP_002113368 |
Protein GI | 194734525 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.533887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0135729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCTGA AGCGAGCGCG ACTTATACCG CGCGGTATTA CTCTACCGGG AAAGCAGAGG CTGGGACAGT CGCTGCCACC CTTCAATACG CCGTTTCGTA TAAATAATTG TCGCTACGGT CTGGCGTTGA AACGCCAGAC CATTTTCAAT CGCCAGGGAG TTGTTGAGAT GAAAATGGAT ACCCGACATT CCGCATTATA TTACTTAATA GTTTTTCTAT TGCTGGCCCT ACCCGCCACA GCATCGTGGG CGAGCGTTAC TATTTTGGGT AGCCGAATAA TTTACCCATC AACAGCCTCC TCCGTAGATG TGCAGTTAAA AAATAATGAT GCAATACCTT ATATCGTACA AACCTGGTTT GACGATGGCG ATATGAATAC CAGCCCGGAA AATAGTAGCG CGATGCCGTT CATTGCCACG CCGCCGGTAT TTCGTATTCA ACCCAAAGCA GGCCAGGTTG TACGCGTAAT TTATAACAAC ACGAAAAAAT TGCCGCAGGA TCGTGAGTCA GTATTCTGGT TTAACGTATT ACAGGTACCA CCAACGAATA TTGGCAGCGA CGGCGGGCAA AATAAAATGT TGGTGATGCT GCGCTCAAGA ATAAAACTTT TCTATCGTCC TGACGGGCTA GGTAAACCTG ATAATCTGGC GAAAAAACTA CAGATTAAAA CGGTAAATAA GGGTTCCGGA AAAAGCGGTA TTGTTATTGT TAATCCGCAG CCCTGGTTTG CCTCTTTAAG TAACCTGAAT GTAAAAGTGA ACGGCGCTTC GTATAACCTG GATGCTGACA TGATTGCCCC TTTTTCCAGT CAAACCTGGT GGCTGCCGGG CAAACGGTCA CTCAAATCCT TCTCCGGTAC AGTCACCGTT ACTTTGGTTA ACGACCTGGG CGCAAGGATA AGCGAGAGCT ACGATGTCCC CCACCATTAA
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Protein sequence | MLLKRARLIP RGITLPGKQR LGQSLPPFNT PFRINNCRYG LALKRQTIFN RQGVVEMKMD TRHSALYYLI VFLLLALPAT ASWASVTILG SRIIYPSTAS SVDVQLKNND AIPYIVQTWF DDGDMNTSPE NSSAMPFIAT PPVFRIQPKA GQVVRVIYNN TKKLPQDRES VFWFNVLQVP PTNIGSDGGQ NKMLVMLRSR IKLFYRPDGL GKPDNLAKKL QIKTVNKGSG KSGIVIVNPQ PWFASLSNLN VKVNGASYNL DADMIAPFSS QTWWLPGKRS LKSFSGTVTV TLVNDLGARI SESYDVPHH
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