Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0296 |
Symbol | |
ID | 6519993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 306670 |
End bp | 307713 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642745457 |
Product | ImpA-related N- family protein |
Protein accession | YP_002113282 |
Protein GI | 194736484 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.153181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.644226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGA CTAAACCGGT AAGCGCGGAA CAACCCTGCG GCCCCGATCC GGAGTACGAT CCGGAGTACC TGCTGCTGTT CAGCCGCGCC GCCCCCCAGG CGGAGGCGCA ATATGGTGAT TTTGTCAGTA CGCCGGAAGC CGTGAACTGG CCGGAAATTG AGCGTGATGC GCGCCGTCTG CTCACGCGCA GTAAGGATAT CCGGGTGTTG ATCCTGCTGC TGCGCAGTCG CATCCAGCAG GCTGGCGCAC AGGGACTGGC GGAAATGCTC ACACAACTGG CAGAACTGAG CGTAATCTGG TCTGATGCAC TCCATCCACA GCTGCTTACC GGCGAAGGCG CATCCGCAGA ATCTATTGAA GATGCGGCGC TGGTGCGCAG TAATGCCCTG GCGGCGCTGC TGGATCACGA AGGCGTGATG GCAGACATTC GCGGTATCAC GCTGTCAAAC AGTGCCGCCC TGCGCCTGCA GGTACGGGAT GTCGAGCGCG CGTTATCCGC TCCCCGCCCG GCTGATGCGC TGGCCCCCGA ATCCGTCCGC CAGCAACTGG CCGACCTCGA AGCCCGTGGG GCATTACCGC TGGCGGCGTT TCGCGAAGCG CAGGAAAGCG CAGAACGCCT GCAAGTGTGG GCGCGTGAGA CATTAGGCGA TCTGGCTCCA GATTTTTCAC GCCTGCGGCA GTTGTTGGCG CTGCTGCCTG ACGTGGTACA GACAACCACG CCGGAAATCC CTCCGTCGCC AGCGCCAGAC CCCGCAGGCA CGGTTATGGT TAATGCCGTT CCGGCACGGG CAGAGGATGT GCCGCCTGTC AACACGCCCC CCGGTATATC CCTCCCACAC AATGCTGAAC CGGGGCCAAT TCGCGATCGT AATGATGCGC TGGAACGCCT GCGGTGCATT CGTCGCTGGT TTGAGAGCAG TGAACCCAGC AGCCCGACCA TCCCACTGTT ACGCCAGGCT GAAAGACTGG TGGGAAAACG GTTCTCGGAG GTGATCAATG AAATCCCGGT GGAGTTGCTG GAGAAGTGGG ATGCCCTGGA ATGA
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Protein sequence | MSLTKPVSAE QPCGPDPEYD PEYLLLFSRA APQAEAQYGD FVSTPEAVNW PEIERDARRL LTRSKDIRVL ILLLRSRIQQ AGAQGLAEML TQLAELSVIW SDALHPQLLT GEGASAESIE DAALVRSNAL AALLDHEGVM ADIRGITLSN SAALRLQVRD VERALSAPRP ADALAPESVR QQLADLEARG ALPLAAFREA QESAERLQVW ARETLGDLAP DFSRLRQLLA LLPDVVQTTT PEIPPSPAPD PAGTVMVNAV PARAEDVPPV NTPPGISLPH NAEPGPIRDR NDALERLRCI RRWFESSEPS SPTIPLLRQA ERLVGKRFSE VINEIPVELL EKWDALE
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