| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A0183 |
|---|
| Symbol | |
|---|
| ID | 6519278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 192300 |
|---|
| End bp | 193067 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642745351 |
|---|
| Product | DeoR-family transcriptional regulator |
|---|
| Protein accession | YP_002113183 |
|---|
| Protein GI | 194738300 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.341023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAC AACACCGTCT GGATCTCATT GTGGCGTATC TGAAAAACCA TACGCTGGTT
ACGGTAGAAC AGCTGGTTGA GGCGGTTGAC GCATCACCAG CCACTATCCG TCGCGATTTG
ATCAAGCTGG ATGAGCAGGG TGTGATCAGC CGTAGTCATG GCGGCGTGGC GCTGCGGCGT
TTTGAACCCG CCCAGCCCAC CACCAATGAA AAACAACTGC GATCGCCTGC TGAAAAACGG
GCGATCGCAC GCGTTGCCGC ATCGCTGGTG AATGCTGGCG ATGCCGTCGT GCTGGATGCA
GGTACGACAA TGATGGAGCT GGCGAAATGC TTAACCCATC TTCCGCTGCG GGTCATCACC
GTCGATCTGC ATATTGCGCT GTTTTTAGCT GAGTTCCGGC AAATTGAAGT GACGATTGTC
GGCGGTCGTA TCGATGACAG CAGTCAGTCC TGTATCGGTG AGCATGGGCG TAAGCTGTTG
CGTAGCGTGT ATCCGAACAT CGCGTTTATG AGCTGTAATT CATGGGAGGT AAAAACGGGC
GTGACGACCC CAACGGAAGA TAAGGCCGGG CTTAAACAGG AGATTATTGC TAATGCGCAG
CGCAAAGTGT TGCTGGCGGA CAGCAGTAAG TATGGCGCGC ATTCGCTCTT TAATGTGGTG
CCGCTTGAGC GCTTTAATGA TGTGATTACC GACGTCAATC TGCCGCCGTC AGCGCAGGTT
GAACTGAAAG GGCGCGCTTT TGCGCTAACG CTGGTGCAGC CGGAGTGA
|
|---|
| Protein sequence | MKGQHRLDLI VAYLKNHTLV TVEQLVEAVD ASPATIRRDL IKLDEQGVIS RSHGGVALRR
FEPAQPTTNE KQLRSPAEKR AIARVAASLV NAGDAVVLDA GTTMMELAKC LTHLPLRVIT
VDLHIALFLA EFRQIEVTIV GGRIDDSSQS CIGEHGRKLL RSVYPNIAFM SCNSWEVKTG
VTTPTEDKAG LKQEIIANAQ RKVLLADSSK YGAHSLFNVV PLERFNDVIT DVNLPPSAQV
ELKGRAFALT LVQPE
|
|---|
| |