Gene SeSA_A0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0119 
SymboltbpA 
ID6519522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp125629 
End bp126612 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content55% 
IMG OID642745293 
Productthiamine transporter substrate binding subunit 
Protein accessionYP_002113125 
Protein GI194737519 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0289441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAAAAA AATATCTTCC GCTTTTACTC CTGTGCGCGG CGCCTGCTTT CGCCAAATCC 
GTTCTCACCG TCTATACCTA CGACTCGTTC GCCGCCGACT GGGGGCCAGG CCCGGCGGTG 
AAAAAAGCGT TTGAAGCCGA TTGCAACTGC GAGCTGAAAC TGGTGGCGCT GGAGGATGGC 
GTTTCGCTGC TCAACCGCCT GCGGATGGAG GGGAAGAACA GCAAAGCCGA TGTGGTGTTG 
GGGCTGGACA ATAATCTGCT GGAAGCGGCC ACGCAAACTA AACTTTTTGC CAAAAGCGGC 
GTGGCGAATG AGGCGGTCAA GGTGCCCGGC GGCTGGAAAA ACGACACATT TGTGCCGTTC 
GATTACGGCT ATTTCGCCTT TGTCTACGAT AAAAGCAAAC TGAAAAATCC GCCGAAAAGC 
CTGAAAGAAC TGGTCGAGAG CGATCAAAAA TGGCGGGTGA TTTATCAGGA CCCGCGTACC 
AGTACGCCAG GGCTGGGGCT GTTACTGTGG ATGCGCAAAG TCTATGGCGA TAACGCGCCG 
CAGGCCTGGC AAAAACTGAC GGCCAAAACG GTGACGGTGA CGAAAGGCTG GAGCGAGGCC 
TACGGTTTAT TTCTGAAAGG TGAAAGCGAT TTGGTGCTCA GTTACACCAC CTCTCCGGCG 
TATCACATTA TTGAAGAGAA GAAGGACAAT TACGCCGCCG CGAACTTCAG CGAAGGCCAT 
TACTTACAGG TAGAAGTCGC GGCGCGTACC GTCGCCAGTA AGCAGCCGGA ACTGGCGGAG 
AAATTCCTCA AATTTATGGT TTCTCCGGCG TTTCAGAACG CCATACCCAC CGGCAACTGG 
ATGTACCCGG TAGCGGACGT CGCCTTACCC GCAGGGTTTG AATCATTGGC CAAACCCGCC 
ACAACGCTGG AATTCACGCC GCAACAAGTG GCATCACAAC GCCAGGCATG GATTAGCGAA 
TGGCAACGCG CCGTCAGCCG TTAA
 
Protein sequence
MLKKYLPLLL LCAAPAFAKS VLTVYTYDSF AADWGPGPAV KKAFEADCNC ELKLVALEDG 
VSLLNRLRME GKNSKADVVL GLDNNLLEAA TQTKLFAKSG VANEAVKVPG GWKNDTFVPF 
DYGYFAFVYD KSKLKNPPKS LKELVESDQK WRVIYQDPRT STPGLGLLLW MRKVYGDNAP 
QAWQKLTAKT VTVTKGWSEA YGLFLKGESD LVLSYTTSPA YHIIEEKKDN YAAANFSEGH 
YLQVEVAART VASKQPELAE KFLKFMVSPA FQNAIPTGNW MYPVADVALP AGFESLAKPA 
TTLEFTPQQV ASQRQAWISE WQRAVSR