Gene SeSA_A0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0066 
SymbolcitE 
ID6516058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp69997 
End bp70866 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content55% 
IMG OID642745241 
Productcitrate (pro-3S)-lyase, beta subunit 
Protein accessionYP_002113073 
Protein GI194734726 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAC GTCGCAGTAT GTTGTTTATC CCCGGCGCAA ATGCGGCCAT GTTGAGCACC 
TCGTTTGTCT ATGGTGCGGA CGCGGTGATG TTCGACTTAG AAGACGCCGT AGCGTTACGT
GAGAAAGATA CCGCCCGTCT TTTAGTCCAT CACGCGCTTC AACATCCGTT CTATCAGGAT
GTTGAAAAAG TGGTGCGCAT TAATCCACTG AACACGCCGT TTGGTCTGGC CGATCTTGAG
GCCGTCGTGC GTGGTGGCGC GGATATTGTG CGTCTGCCGA AAACCGACAG CAAAAACGAT
GTGCTGGAGC TGGAAGCGCA GGTCGAACGG ATCGAACGTG AATGCGGACG CGAGGTCGGC
AGTACCAGGC TGATGGCGGC GATCGAATCA GCGAAAGGCG TGGTCAATGC CGTCGACATC
GCCACCTCCA GCCCGCGCAT GGTGGCAATT GCGCTGGCGG CATTTGATTA CGTGATGGAT
ATGGGCACCA GCCGGGGCGA TGGCACCGAG CTGTTCTACG CCCGCTGCGC AGTGCTGCAC
GCGGCGCGTG TTGCGGGTAT TGCCGCCTAT GATGTTGTTT GGTCGGATAT CAATAATGAA
GAAGGCTTCC TGAAGGAAGT GCAGTTGGCG AAAGGACTTG GTTTTAACGG TAAGTCCTTA
GTGAATCCAC GTCAGATTGA GCTGTTACAT CAGGCTTATT CTCCGACACG TAAAGAAGTT
GAGCATGCGT ATGAGGTGAT TGCCGCCGCT GAAGAGGCTG AGTCTCGCGG TCTGGGCGTC
GTTTCACTCA ACGGCAAAAT GATTGACGGC CCGATTATCG ACCACGCGCG CAAAGTGGTG
GCGCTGTCGG CTTCCGGTAT TCGTGATTAA
 
Protein sequence
MRPRRSMLFI PGANAAMLST SFVYGADAVM FDLEDAVALR EKDTARLLVH HALQHPFYQD 
VEKVVRINPL NTPFGLADLE AVVRGGADIV RLPKTDSKND VLELEAQVER IERECGREVG
STRLMAAIES AKGVVNAVDI ATSSPRMVAI ALAAFDYVMD MGTSRGDGTE LFYARCAVLH
AARVAGIAAY DVVWSDINNE EGFLKEVQLA KGLGFNGKSL VNPRQIELLH QAYSPTRKEV
EHAYEVIAAA EEAESRGLGV VSLNGKMIDG PIIDHARKVV ALSASGIRD