Gene SeHA_C4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4888 
Symbol 
ID6490843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4759695 
End bp4760726 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content50% 
IMG OID642744934 
ProductL-idonate 5-dehydrogenase 
Protein accessionYP_002048507 
Protein GI194449325 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.138899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTAA AAACTCAATC CTGCGTTGTT GCGGGTAAGC GTGCTGTTGC CGTTACGGAA 
CAAAATATTG AATGGAATAA TAAAGGAACA CTCGTACAAA TTACCCGAGG CGGCATTTGT
GGGTCTGACT TACATTATTA TCAGGAAGGC AAAGTCGGCA ATTTTACAGT AAAAGCGCCA
ATGATTTTAG GTCATGAAGT GATTGGCAAA ATCGTTCATA GCGACTCAGA TTTATTACGT
GAAGGACAAC CGGTAGCGAT TAATCCATCG AAGCCTTGCG GTCATTGCAA ATACTGTCTG
CAGCATGAAG AAAACCACTG TACTGAAATG CGTTTCTTTG GCAGCGCCAT GTATTTTCCG
CATGTCGATG GCGGTTTTAC CCGATTTAAA GCTGTCGATA CCGTTCAGTG CATTCCCTGG
CCGGAACAGG CAGACGAAAA AGCCATGGCC TTTGCCGAAC CGCTGGCGGT TGCCATTCAT
GCGGCTCATG AGGCGGGCGA TCTGCAAGGC AAACGCGTCT TTATCTCCGG CGTTGGCCCT
ATCGGCTGCC TGATTGTTAG CGCGGTAAAA ACGCTGGGCG CGGCGGAAGT AGTATGTGCC
GATATCAGCG CCCGTTCTCT CTCGCTGGCC CGGCAGATGG GCGCGGATAC GCTGGTGAAC
CCACAGCATG ATTCTCTCGA TGACTGGAAA GCAGAAAAAG GGTATTTCGA TATCAGTTTT
GAAGTCTCTG GGCATCCTTC CTCTATCTCA ACGTGTCTGG AAGTCACACG GGCCAAAGGC
GTGATGGTGC AGGTTGGCAT GGGCGGCGCA GTCCCCAACT TCCCGATGAT GATGGTAATA
AGCAAAGAGA TCTCCCTGAA AGGCTCTTTC CGCTTTACTA CCGAATTTAA TACTGCGGTT
TCCTGGCTTG CCAACCGCGT TATCAATCCG CTGCCGTTAC TGAGCGCGGA ATATCCATTT
ACCGACCTGG AAGCGGCGCT GCTCTTTGCC GGAGACAAAA CACAGGCGGC AAAAGTTCAG
CTCGTTTTCT GA
 
Protein sequence
MEVKTQSCVV AGKRAVAVTE QNIEWNNKGT LVQITRGGIC GSDLHYYQEG KVGNFTVKAP 
MILGHEVIGK IVHSDSDLLR EGQPVAINPS KPCGHCKYCL QHEENHCTEM RFFGSAMYFP
HVDGGFTRFK AVDTVQCIPW PEQADEKAMA FAEPLAVAIH AAHEAGDLQG KRVFISGVGP
IGCLIVSAVK TLGAAEVVCA DISARSLSLA RQMGADTLVN PQHDSLDDWK AEKGYFDISF
EVSGHPSSIS TCLEVTRAKG VMVQVGMGGA VPNFPMMMVI SKEISLKGSF RFTTEFNTAV
SWLANRVINP LPLLSAEYPF TDLEAALLFA GDKTQAAKVQ LVF