Gene SeHA_C4885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4885 
Symbol 
ID6491470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp4756463 
End bp4757461 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content50% 
IMG OID642744931 
ProductHTH-type transcriptional regulator IdnR 
Protein accessionYP_002048504 
Protein GI194451665 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAATC ACAGAATTTC TTTGCAGGAT ATCGCTACGC TTGCTGGCGT GACAAAAATG 
ACGGTGAGCC GTTACATCCG CTCGCCGAAA AAAGTCGCCA GGGAAACCGG CGAGCGTATT 
GCGCAGATCA TGGAGGAAAT TAACTACATA CCAAATCGCG CGCCAGCTAT GCTGTTAAAC 
GCGCAAAGTT ACACTCTGGG CGTGCTGATC CCCTCTTTTC AGAACCAGTT GTTTGCCGAC 
ATTCTTGCCG GGATTGAATC CGTAACGTCG GGTCATAACT ACCAAACTCT CATTGCGAAT 
TACAATTACA ATCGCGATTC GGAAGAAGAG TCCGTTATCA ATTTATTGTC CTACAATATC 
GACGGCATTA TTCTTTCAGA AAAATATCAT ACCCTCAGAA CCGTCAAATT CCTGCGCTCA 
GCTACCCTTC CGATTGTAGA ACTCATGGAT ATCCAGGGCG ATCGCTTAGA TATGGAGGTG 
GGGTTTGATA ACCGTCAGGC CGCCTTTGAT ATGGTCAGTA CCATGCTGGA TAAACGCCAG 
CGGCGGAAAA TTCTCTATCT GGGTTCAAAA GACGATATCC GTGATGAGCA GCGTTATCAC 
GGCTACTGCG ATGCGATGAC GCGCCGGGGG CTGGCGCCGT TGCGCATCAA TCCCCGCGCT 
ATCTCCTCTA TCCATCTGGG GATACAGCTA ATGCGTGATG CGCTTACTGC GCACCCGGAC 
GTGGATGGCG TCTTTTGTAC TAACGACGAT ATCGCAATGG GCGCTCTACT GTGGTGCCGC 
GAGCGTCAAC TGGCCGTACC GGAGCAGATC TCCATCGCCG GCTTCCACGG TCTGGAGATG 
GGCAGGCAAA TGATACCGAG CCTCGCCAGC GTAATTACCC CTCGTTTTGA GATCGGGCGC 
AGAGCCGCGC AGATGTTGCT CAACAAAATT AAAAATAACG ATCTCAACCA TAATACGATT 
GATTTGGGTT ATCAGATTTA TCACGGCAAC ACATTATAA
 
Protein sequence
MRNHRISLQD IATLAGVTKM TVSRYIRSPK KVARETGERI AQIMEEINYI PNRAPAMLLN 
AQSYTLGVLI PSFQNQLFAD ILAGIESVTS GHNYQTLIAN YNYNRDSEEE SVINLLSYNI 
DGIILSEKYH TLRTVKFLRS ATLPIVELMD IQGDRLDMEV GFDNRQAAFD MVSTMLDKRQ 
RRKILYLGSK DDIRDEQRYH GYCDAMTRRG LAPLRINPRA ISSIHLGIQL MRDALTAHPD 
VDGVFCTNDD IAMGALLWCR ERQLAVPEQI SIAGFHGLEM GRQMIPSLAS VITPRFEIGR 
RAAQMLLNKI KNNDLNHNTI DLGYQIYHGN TL