| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4779 |
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| Symbol | hfq |
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| ID | 6489574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 4658515 |
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| End bp | 4658823 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642744831 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_002048404 |
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| Protein GI | 194449618 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00124447 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.127412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGG GGCAATCTTT ACAAGATCCG TTCGTGAACG CATTGCGTCG GGAACGTGTT
CCAGTTTCTA TTTATTTGGT GAATGGTATT AAGCTGCAAG GTCAAATCGA GTCCTTTGAT
CAGTTCGTGA TCCTGTTGAA GAACACGGTC AGCCAGATGG TTTATAAGCA CGCGATTTCT
ACTGTTGTCC CGTCTCGCCC GGTTTCCCAT CACAGCAACA ATGCCGGTGG CGGCGCCAGC
AATAACTACC ATCACGGTAG CAACGCGCAG GGTTCTACTG CGCAACAGGA CAGCGAAGAG
ACTGAATAA
|
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| Protein sequence | MAKGQSLQDP FVNALRRERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS
TVVPSRPVSH HSNNAGGGAS NNYHHGSNAQ GSTAQQDSEE TE
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