| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4636 |
|---|
| Symbol | |
|---|
| ID | 6490884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 4526936 |
|---|
| End bp | 4528438 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642744704 |
|---|
| Product | proline/glycine betaine transporter |
|---|
| Protein accession | YP_002048281 |
|---|
| Protein GI | 194448568 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAA GGAAAAAAAT AAAACCGATT ACACTGGGCG ATGTGACCAT CATTGATGAT
GGTAAACTTC GCAAAGCGAT TACCGCCGCC TCGCTGGGCA ACGCGATGGA GTGGTTTGAT
TTTGGTGTTT ATGGATTTGT TGCCTACGCG TTGGGTAAAG TCTTTTTCCC CGGCGCCGAT
CCCAGCGTCC AGATGATTGC CGCGCTGGCC ACGTTTTCCG TTCCCTTCCT GATTCGTCCG
CTCGGCGGGT TATTCTTTGG TATGCTCGGC GATAAATACG GGCGCCAGAA GATCCTGGCG
ATCACGATTG TGATTATGTC GATCAGTACC TTCTGTATCG GGTTAATCCC CTCTTACGCG
ACGATCGGTA TCTGGGCGCC AATACTGTTG TTGCTGTGTA AAATGGCGCA GGGCTTCTCG
GTTGGCGGGG AATATACCGG CGCGTCGATC TTTGTCGCGG AATATTCGCC GGATCGTAAA
CGCGGATTTA TGGGAAGCTG GCTGGATTTT GGTTCCATCG CCGGGTTCGT GCTGGGCGCG
GGCGTGGTGG TCTTGATCTC AACGATTGTC GGCGAGGAGA ATTTCCTTGA GTGGGGCTGG
CGTATTCCGT TCTTTATCGC CCTGCCATTG GGGATTATTG GTCTCTACTT ACGCCATGCG
CTGGAGGAGA CGCCAGCGTT TCAGCAGCAC GTGGATAAAC TGGAGCAGGG CGACCGCGAA
GGGTTGCAGG ATGGGCCGAA AGTCTCCTTT AAAGAAATTG CCACCAAACA CTGGCGTAGC
CTGTTGTCAT GTATCGGTCT GGTGATTGCC ACCAACGTGA CCTACTACAT GCTGCTCACC
TACATGCCGA GCTACCTGTC GCATAACCTG CACTATTCTG AAGATCACGG CGTGTTGATT
ATCATCGCCA TTATGATCGG GATGCTGTTT GTGCAGCCGG TGATGGGGCT GCTGAGCGAC
CGTTTCGGTC GACGTCCATT TGTGATTATG GGCAGCATTG CGCTGTTCGC GCTGGCGATC
CCGGCCTTCA TCCTGATTAA CAGTAACGTT ATTGGCCTGA TTTTTGCCGG TTTGTTGATG
CTGGCGGTGA TTCTGAACTG CTTTACCGGG GTGATGGCCT CGACATTGCC GGCGATGTTT
CCGACGCATA TTCGTTACAG CGCGCTGGCG GCGGCTTTTA ATATCTCTGT ATTGATTGCC
GGTCTGACGC CAACGCTGGC GGCCTGGCTG GTGGAAAGCT CGCAGGATCT GATGATGCCG
GCGTATTATT TGATGGTCAT CGCGGTGATA GGCTTGATTA CCGGTATTTC CATGAAAGAG
ACGGCCAATC GTCCGTTAAA AGGCGCAACG CCAGCGGCGT CGGACATCCA GGAAGCGAAG
GAAATTCTGG GCGAGCATTA CGATAATATT GAGCAGAAAA TCGACGACAT CGATCAGGAA
ATTGCGGAGC TGCAGGTCAA ACGTTCGCGT CTGGTACAGC AACATCCGCG TATCGATGAA
TAA
|
|---|
| Protein sequence | MLKRKKIKPI TLGDVTIIDD GKLRKAITAA SLGNAMEWFD FGVYGFVAYA LGKVFFPGAD
PSVQMIAALA TFSVPFLIRP LGGLFFGMLG DKYGRQKILA ITIVIMSIST FCIGLIPSYA
TIGIWAPILL LLCKMAQGFS VGGEYTGASI FVAEYSPDRK RGFMGSWLDF GSIAGFVLGA
GVVVLISTIV GEENFLEWGW RIPFFIALPL GIIGLYLRHA LEETPAFQQH VDKLEQGDRE
GLQDGPKVSF KEIATKHWRS LLSCIGLVIA TNVTYYMLLT YMPSYLSHNL HYSEDHGVLI
IIAIMIGMLF VQPVMGLLSD RFGRRPFVIM GSIALFALAI PAFILINSNV IGLIFAGLLM
LAVILNCFTG VMASTLPAMF PTHIRYSALA AAFNISVLIA GLTPTLAAWL VESSQDLMMP
AYYLMVIAVI GLITGISMKE TANRPLKGAT PAASDIQEAK EILGEHYDNI EQKIDDIDQE
IAELQVKRSR LVQQHPRIDE
|
|---|
| |