Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4499 |
Symbol | nfi |
ID | 6487948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 4380619 |
End bp | 4381290 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642744573 |
Product | endonuclease V |
Protein accession | YP_002048153 |
Protein GI | 194451186 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.105241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCG CGTCGCTACG CGCTCAACAG ATAGAACTTG CTTCATCGGT TTGCCGCGAA GATCGCCTGG ACAAAGATCC GCCAGCGTTT ATCGGCGGGG CGGACGTCGG TTTTGAGCAA GGGGGCGAGG TGACGCGGGC GGCGATGGTA TTGCTGAAAT ATCCGTCGCT TGAGCTGGTA GAGTACAAGG TGGCGCGTAT TGCCACCACC ATGCCGTATA TCCCCGGTTT TCTCTCTTTT CGTGAATATC CTGCGCTGCT GGCGGCGTGG GAACAGCTCT CGCAAAAGCC CGATTTGCTG TTTGTGGACG GTCACGGTAT TTCGCATCCG CGTCGGCTTG GCGTCGCCAG TCATTTTGGA CTGTTGGTGG ACGTGCCGAC CATCGGCGTG GCGAAAAAAC GGCTATGCGG TAAATTTGAA CCACTTTCCA CCGAACCTGG CGCACTTAGC CCCTTAATGG ATAAAGGCGA GCAACTGGCG TGGGTATGGC GCAGCAAGGC GCGCTGTAAT CCGCTGTTTA TCGCGACAGG GCACCGGGTC AGTACTGACA GCGCGCTGGC GTGGGTACAG CGCTGTATGA AAGGGTATCG CCTGCCGGAG CCGACGCGCT GGGCGGATGC CGTCGCTTCC GGGCGTCCGG CGTTTGTTCG TTGGCAAGAA ATTCAGCGCT GA
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Protein sequence | MDLASLRAQQ IELASSVCRE DRLDKDPPAF IGGADVGFEQ GGEVTRAAMV LLKYPSLELV EYKVARIATT MPYIPGFLSF REYPALLAAW EQLSQKPDLL FVDGHGISHP RRLGVASHFG LLVDVPTIGV AKKRLCGKFE PLSTEPGALS PLMDKGEQLA WVWRSKARCN PLFIATGHRV STDSALAWVQ RCMKGYRLPE PTRWADAVAS GRPAFVRWQE IQR
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