Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4493 |
Symbol | thiE |
ID | 6490794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 4375256 |
End bp | 4375891 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642744568 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_002048148 |
Protein GI | 194449066 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.0244501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCAGC CTGATTTCCC GACCGTGCCG TTCCGTCTCG GGCTTTACCC GGTGGTGGAC AGCGTTGCAT GGATTGAGCG CCTGCTGGAG GCGGGCGTGC GCACGATCCA GTTGCGTATC AAAGATAAAC GCGATGAAGA GGTGGAAGCC GACGTTATCG CCGCCATCGC ACTGGGGCGT CGTTATGACG CCCGGCTGTT TATCAACGAT TACTGGCGTC TGGCAATTAA ACACCGCGCT TACGGCGTGC ATCTGGGCCA GGAAGACCTT GAAACCACCG ACCTGAAAGC GATTCAGGCG GCGGGGTTAC GCCTGGGGGT ATCCACTCAC GATGATATGG AGATAGACAT CGCGCTGGCC GCTAAGCCTT CTTATATCGC GCTGGGTCAT GTCTTCCCCA CGCAAACCAA ACAGATGCCT TCCGCCCCGC AGGGGCTGGC GCAGCTGGCG CGGCATATTG ACCGGCTGGC GGATTATCCC ACCGTGGCGA TTGGCGGCAT CAGTGTGGAA CGCGCTCCGG CGGTGCTGGC GACCGGCGTC GGCAGCATTG CCGTGGTCAG CGCTATTACT CAGGCCGCCG ACTGGCGCGC CGCTACCGCG CAGTTACTGG ATATTGCGGG AGTTGGCGAT GAATGA
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Protein sequence | MYQPDFPTVP FRLGLYPVVD SVAWIERLLE AGVRTIQLRI KDKRDEEVEA DVIAAIALGR RYDARLFIND YWRLAIKHRA YGVHLGQEDL ETTDLKAIQA AGLRLGVSTH DDMEIDIALA AKPSYIALGH VFPTQTKQMP SAPQGLAQLA RHIDRLADYP TVAIGGISVE RAPAVLATGV GSIAVVSAIT QAADWRAATA QLLDIAGVGD E
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