Gene SeHA_C4493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4493 
SymbolthiE 
ID6490794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4375256 
End bp4375891 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID642744568 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_002048148 
Protein GI194449066 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0244501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAGC CTGATTTCCC GACCGTGCCG TTCCGTCTCG GGCTTTACCC GGTGGTGGAC 
AGCGTTGCAT GGATTGAGCG CCTGCTGGAG GCGGGCGTGC GCACGATCCA GTTGCGTATC
AAAGATAAAC GCGATGAAGA GGTGGAAGCC GACGTTATCG CCGCCATCGC ACTGGGGCGT
CGTTATGACG CCCGGCTGTT TATCAACGAT TACTGGCGTC TGGCAATTAA ACACCGCGCT
TACGGCGTGC ATCTGGGCCA GGAAGACCTT GAAACCACCG ACCTGAAAGC GATTCAGGCG
GCGGGGTTAC GCCTGGGGGT ATCCACTCAC GATGATATGG AGATAGACAT CGCGCTGGCC
GCTAAGCCTT CTTATATCGC GCTGGGTCAT GTCTTCCCCA CGCAAACCAA ACAGATGCCT
TCCGCCCCGC AGGGGCTGGC GCAGCTGGCG CGGCATATTG ACCGGCTGGC GGATTATCCC
ACCGTGGCGA TTGGCGGCAT CAGTGTGGAA CGCGCTCCGG CGGTGCTGGC GACCGGCGTC
GGCAGCATTG CCGTGGTCAG CGCTATTACT CAGGCCGCCG ACTGGCGCGC CGCTACCGCG
CAGTTACTGG ATATTGCGGG AGTTGGCGAT GAATGA
 
Protein sequence
MYQPDFPTVP FRLGLYPVVD SVAWIERLLE AGVRTIQLRI KDKRDEEVEA DVIAAIALGR 
RYDARLFIND YWRLAIKHRA YGVHLGQEDL ETTDLKAIQA AGLRLGVSTH DDMEIDIALA
AKPSYIALGH VFPTQTKQMP SAPQGLAQLA RHIDRLADYP TVAIGGISVE RAPAVLATGV
GSIAVVSAIT QAADWRAATA QLLDIAGVGD E