Gene SeHA_C4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4445 
Symbol 
ID6490072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4329118 
End bp4329954 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID642744527 
ProductAraC family transcriptional regulator 
Protein accessionYP_002048116 
Protein GI194447781 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.00788504 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATCACG ACGTCAGCCA CCTTCTCTCC CGTCTCATCA ACGGCCCGCT GCCGCTGCGC 
CAGATTTATT TTGCCAGCGC CAGCGGCCCA GCGCCGGAAC TGGCGTACCA GGTGGATTTT
CCGCGGCTGG AGATTGTGCT GGAGGGCGAG CTTACTGACA TGAGCATTAC CGCCCCGCTC
ATTCCTTGCG ATGTTCTCTA CGTTCCGGCT GGCGGCTGGA ACATCCCGCA ATGGCAAACG
CCCGTCACCA CCCTGAGCAT TCTGTTTGGC AAACAGCAGT TAGGTTTCAG CGTAGTCCAC
TGGGATGGTC AGCAGCATCA AAACCTCACG AAACAGCACG TTGCGCGCCG CGGCCCGCGT
ATCGGCTCGT TCCTGTTACA AACGCTTAAT GAGATGCAGA TGCAGCCGCA AGAGCAGCAA
ACGGCCAGAT TGATTGTCGC CAGCCTGCTA AGCCATTGCC GCGATCTGCT CGGCAGCCAA
ATCCAGACCG CCTCCCGCAG CCGCGCGCTT TTTGAAGCCA TTCGGGAGTA TATTGATGAA
CGCTACGCCG CGCCGTTGAC GCGCGAATCG GTAGCACAGG CGTTTTATAT CTCGCCAAAT
TACCTCTCGC ACCTGTTCCA GAAAACGGGG GCCATCGGCT TTAACGAATA CCTGAACCAT
ACGCGACTGG AACACGCCAA AACGTTGCTG AAGGGTTATG ACCTGAAAGT GAAAGAGGTG
GCGCACCGTT GCGGCTTTGT CGACAGTAAC TATTTCTGCC GCCTGTTTCG CAAAAATACG
GAACGCTCGC CGTCGGAGTA TCGCCGCCAG TATCACAGCC AGCTAACGGA GAAATAA
 
Protein sequence
MYHDVSHLLS RLINGPLPLR QIYFASASGP APELAYQVDF PRLEIVLEGE LTDMSITAPL 
IPCDVLYVPA GGWNIPQWQT PVTTLSILFG KQQLGFSVVH WDGQQHQNLT KQHVARRGPR
IGSFLLQTLN EMQMQPQEQQ TARLIVASLL SHCRDLLGSQ IQTASRSRAL FEAIREYIDE
RYAAPLTRES VAQAFYISPN YLSHLFQKTG AIGFNEYLNH TRLEHAKTLL KGYDLKVKEV
AHRCGFVDSN YFCRLFRKNT ERSPSEYRRQ YHSQLTEK