Gene SeHA_C4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4290 
SymbolmetR 
ID6489934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp4176936 
End bp4177889 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content58% 
IMG OID642744379 
Producttranscriptional regulator MetR 
Protein accessionYP_002047973 
Protein GI194451587 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.305049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.326803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA TTAAACATCT GAAAACACTC CAGGCATTGC GGAATAGTGG ATCGCTGGCT 
GCTGCTGCTG CGGTGCTGCA CCAGACTCAA TCCGCTCTGT CTCATCAGTT CAGCGATCTG 
GAACAACGCC TTGGCTTCCG CCTGTTCGTG CGTAAAAGCC AGCCGCTGCG CTTTACGCCG 
CAGGGGGAAG TTCTGCTGCA ACTGGCAAAC CAGGTGCTGC CGCAAATCAG CCGTGCGCTG 
CAAGCGTGCA ACGAACCGCA GCAAACTCGT CTGCGCATCG CTATTGAATG TCATAGCTGT 
ATTCAGTGGC TGACCCCGGC GCTGGAAAAC TTCCGTGCAA GCTGGCCGCA GGTAGAAATG 
GATTTCACAT CCGGCGTCAC TTTTGATCCG CAACCGGCCT TGCAACAAGG CGAGCTGGAT 
TTGGTGATGA CGTCGGATAT TTTGCCGCGC AGCGGGCTGC ATTATTCGCC GATGTTTGAT 
TTTGAAGTCC GACTGGTGCT GGCGCCCGAC CATCCGCTGG CCAGCAAAAC GCAGATTACG 
CCGGAAGATT TAGCCAGCGA AACGCTGTTG ATTTACCCGG TGCAGCGCAG CCGACTGGAT 
GTCTGGCGAC ATTTCCTGCA ACCGGCGGGT ATCAGTCCGC TGCTGAAAAG CGTGGATAAT 
ACGCTACTGC TGATTCAGAT GGTGGCAGCC AGAATGGGCA TTGCCGCCCT GCCGCACTGG 
GTGGTGGAAA GCGTTGAGCG CCAGGGTCTG GTGGTGACCA AAACCCTGGG TGATGGTCTG 
TGGAGCCGCC TGTATGCCGC CGTGCGCGAC GGCGACCAGC GTCAGGCGGT GACCGAGGCG 
TTTATTCGCT CGACGCGGGA TCACGCCTGC GATCATCTGC CGTTTGTGCG GAGCGCGGAG 
CGACCCATTT TCGATGCACC CACAGCGAAG CCAGGATCAC AGCCGCGCCT GTAA
 
Protein sequence
MIEIKHLKTL QALRNSGSLA AAAAVLHQTQ SALSHQFSDL EQRLGFRLFV RKSQPLRFTP 
QGEVLLQLAN QVLPQISRAL QACNEPQQTR LRIAIECHSC IQWLTPALEN FRASWPQVEM 
DFTSGVTFDP QPALQQGELD LVMTSDILPR SGLHYSPMFD FEVRLVLAPD HPLASKTQIT 
PEDLASETLL IYPVQRSRLD VWRHFLQPAG ISPLLKSVDN TLLLIQMVAA RMGIAALPHW 
VVESVERQGL VVTKTLGDGL WSRLYAAVRD GDQRQAVTEA FIRSTRDHAC DHLPFVRSAE 
RPIFDAPTAK PGSQPRL