Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4285 |
Symbol | recQ |
ID | 6488220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 4170934 |
End bp | 4172781 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642744375 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_002047969 |
Protein GI | 194447354 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.362747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAACG GGGTTAATGT GGCGCAGGCG GAAGTGTTGA ATCTGGAATC AGGGGCCAAA CAGGTTTTGC AGGAAACCTT TGGCTACCAA CAGTTTCGCC CGGGTCAGGA AGCGATTATT GATACTGCGC TCTCCGGTCG CGACTGTCTG GTCGTCATGC CCACCGGCGG CGGCAAATCT CTGTGCTATC AAATCCCCGC GTTGTTGCTG GACGGGTTGA CTGTCGTCGT TTCGCCATTA ATCTCGTTGA TGAAAGACCA GGTCGATCAG CTACTGGCGA ACGGTGTGGC GGCGGCGTGC CTGAACTCCA CTCAAAGCCG CGAGCAGCAG CTTGAGGTGA TGGCGGGGTG CCGTACCGGA CAGATTCGTC TGCTGTATAT TGCGCCGGAA CGCCTGATGC TGGACAACTT TCTTGATCAT CTGGCGCACT GGAATCCGGT ATTGCTGGCG GTGGATGAAG CGCACTGTAT CTCGCAATGG GGACATGATT TCCGTCCGGA ATATGCGGCG CTCGGTCAGC TTCGCCAGCG TTTTCCCGCT TTGCCGTTTA TGGCATTGAC CGCCACCGCC GACGACACCA CGCGCCAGGA TATTATTCGT CTGCTTGGGC TTAACGATCC GTTAATCCAG ATTAGTAGCT TTGACCGACC GAATATCCGC TACATGCTGA TGGAGAAGTT TAAGCCGCTC GACCAGTTAA TGCGCTATGT TCAGGAGCAA CGCGGCAAAT CGGGTATCAT CTACTGTAAC AGCCGGGCGA AAGTGGAAGA TACCGCTGCG CGCTTGCAAA GTCGCGGCAT TAGCGCGGCG GCCTATCATG CGGGGCTGGA AAACGCTATT CGCGTCGATG TGCAGGAAAA ATTTCAGCGC GACGATCTGC AAATCGTGGT GGCGACCGTC GCTTTTGGAA TGGGCATAAA CAAACCTAAC GTACGTTTCG TCGTGCATTT CGATATCCCG CGCAATATTG AATCCTACTA TCAGGAAACG GGCCGCGCCG GGCGCGACGG ACTGCCTGCG GAAGCCATGC TATTTTACGA TCCGGCTGAT ATGGCCTGGC TACGTCGTTG TCTGGAAGAG AAACCAGCCG GACAGCTTCA GGATATTGAA CGGCATAAAC TGAATGCGAT GGGCGCTTTT GCCGAAGCGC AAACCTGCCG CCGCCTGGTA TTACTTAATT ACTTTGGCGA AGGCCGACAA GAACCGTGCG GCAACTGCGA TATCTGTCTC GATCCGCCCA AACAATATGA TGGCTTAAAC GATGCCCAGA TTGCGCTTTC TACCATTGGT CGGGTTAACC AGCGTTTTGG CATGGGCTAC GTTGTCGAGG TGATCCGCGG CGCGAATAAC CAACGCATCC GCGATTTCGG TCATGACAAA CTCAAGGTTT ATGGCATGGG ACGCGAAAAG AGCCATGAGC ACTGGGTGAG CGTGATTCGC CAGCTCATTC ATCTGGGGCT GGTAATGCAA AATATTGCGC AGCACTCCGC ATTACAGTTG ACGGATGCCG CGCGTCCGGT ACTCCGTGGA GACGTTCCGC TAAAGCTTGC GGTGCCGCGC ATCGTCGCCC TCAAACCCCG CGTGATGCAG AAATCGTTCG GCGGTAATTA CGATCGCAAA TTGTTCGCTA AGTTGCGCAA GCTGCGTAAA GCTATCGCTG ATGAAGAGAA TATCCCGCCG TATGTGGTCT TTAACGACGC CACGCTGATA GAGATGGCGG AACAGATGCC GGTTTCCGCC AGCGAGATGT TAAGCGTTAA CGGGGTTGGG ATGCGCAAAC TGGAGCGCTT CGGGAAAGAA TTTATGGCGC TCATCCGCGC GCATGTCGAT GGTGATGACG AAGAGTAG
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Protein sequence | MVNGVNVAQA EVLNLESGAK QVLQETFGYQ QFRPGQEAII DTALSGRDCL VVMPTGGGKS LCYQIPALLL DGLTVVVSPL ISLMKDQVDQ LLANGVAAAC LNSTQSREQQ LEVMAGCRTG QIRLLYIAPE RLMLDNFLDH LAHWNPVLLA VDEAHCISQW GHDFRPEYAA LGQLRQRFPA LPFMALTATA DDTTRQDIIR LLGLNDPLIQ ISSFDRPNIR YMLMEKFKPL DQLMRYVQEQ RGKSGIIYCN SRAKVEDTAA RLQSRGISAA AYHAGLENAI RVDVQEKFQR DDLQIVVATV AFGMGINKPN VRFVVHFDIP RNIESYYQET GRAGRDGLPA EAMLFYDPAD MAWLRRCLEE KPAGQLQDIE RHKLNAMGAF AEAQTCRRLV LLNYFGEGRQ EPCGNCDICL DPPKQYDGLN DAQIALSTIG RVNQRFGMGY VVEVIRGANN QRIRDFGHDK LKVYGMGREK SHEHWVSVIR QLIHLGLVMQ NIAQHSALQL TDAARPVLRG DVPLKLAVPR IVALKPRVMQ KSFGGNYDRK LFAKLRKLRK AIADEENIPP YVVFNDATLI EMAEQMPVSA SEMLSVNGVG MRKLERFGKE FMALIRAHVD GDDEE
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