Gene SeHA_C4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4113 
Symbol 
ID6490719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3996439 
End bp3997797 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content47% 
IMG OID642744209 
ProductPTS system galactitol-specific IIC component 
Protein accessionYP_002047813 
Protein GI194448391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3775] Phosphotransferase system, galactitol-specific IIC component 
TIGRFAM ID[TIGR00827] PTS system, galactitol-specific IIC component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones111 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATA TAGCACATAC TCTCTATACC GTTGTGCAAT ATGTCCTGGG GTTTGGCCCA 
ACGGTTTTAT TGCCGCTGGT CCTTTTTTTC CTGGCATTGT TCTTCAAAGT AAAACCCGCT
AAAGCACTTC GCTCATCGTT AATTGTCGGA ATAGGGTTTG TCGGAATTTA TGCCATCTTT
GACATACTTA CCAGCAACGT AGGCCCGGCT GCACAGGCAA TGGTTGAGCG AACTGGTATT
AGCCTTCCTG TTGTCGATTT AGGCTGGCCA CCATTGGCCG CAATTACCTG GGGCTCACCA
ATCGCACCCT TTGTCATTCC GCTGACGATG CTGATTAATG TCGCCATGCT GGCCCTGAAT
AAGACACGTA CTGTTGATGT CGACATGTGG AACTACTGGC ACTTTGCCCT GGCTGGAACG
CTGGTTTACT ACAGCACAGG GAGTTTTGTT TTGGGTTTGT CCGCAGCCGC TATTGCCGCG
ATCGTGGTTC TCAAACTGGC GGACTGGTCA GCGCCATTAG TGGCAAAGTA CTTCGGTCTG
GAAGGTATTT CACTTCCGAC CCTGTCATCT GTCGTCTTCT TTCCGATTGG ATTGCTGTTC
GATAAAATTA TCGACAAGAT CCCAGGCGTT AACCGTATTC ATATTGATCC GGAAAACGTT
CAGAAAAAAA TGGGAATCTT CGGCGAGCCT ATGATGGTGG GTACTATTCT GGGGGTCTTG
TTGGGCATCA TTGCCGGATA TGACTTTAAA CATATCCTGT TGCTGGGGAT CAGCATTGGC
GGTGTCATGT TCATTCTTCC GCGTATGGTA CGAATTTTGA TGGAAGGTTT ATTACCTCTG
TCTGAAGCCA TTAAGAAATA TTTGAATGCC AAATATCCTG GCCGTGATGA TCTCTTTATC
GGACTGGATA TCGCGGTAGC AGTAGGTAAC CCAGCCATTA TATCTACAGC ACTGATTCTG
ACACCTATCT CTGTCTTTAT TGCATTCCTT CTTCCTGGCA ATAAAGTCCT GCCACTCGGA
GACCTTGCGA ACCTGGCAGT CATGGCTTCC ATGATTGTAC TGGCATGTCG TGGCAATATT
TTCCGGGCTG TGATAACCGC AATTCCTGTT ATTGTCGCCG ACTTGTGGAT TGCGACCAAA
ATTGCGCCAT TTATTACCGG TATGGCTAAA GATGTCAATT TCAAAATGGC TGAGGGGTCA
AGTGGTCAGG TATCAAGCTT CCTTGATGGC GGTAACCCCT TCCGTTTCTG GCTGCTTGAA
ATATTCAACG GAAATATTAT TGCTATCGGG CTGATTCCTG TGCTTGCGCT GATTATTTAT
GGTGTTTTTC GCCTGACAAA AGGAACGGTC TATGCCTGA
 
Protein sequence
MNDIAHTLYT VVQYVLGFGP TVLLPLVLFF LALFFKVKPA KALRSSLIVG IGFVGIYAIF 
DILTSNVGPA AQAMVERTGI SLPVVDLGWP PLAAITWGSP IAPFVIPLTM LINVAMLALN
KTRTVDVDMW NYWHFALAGT LVYYSTGSFV LGLSAAAIAA IVVLKLADWS APLVAKYFGL
EGISLPTLSS VVFFPIGLLF DKIIDKIPGV NRIHIDPENV QKKMGIFGEP MMVGTILGVL
LGIIAGYDFK HILLLGISIG GVMFILPRMV RILMEGLLPL SEAIKKYLNA KYPGRDDLFI
GLDIAVAVGN PAIISTALIL TPISVFIAFL LPGNKVLPLG DLANLAVMAS MIVLACRGNI
FRAVITAIPV IVADLWIATK IAPFITGMAK DVNFKMAEGS SGQVSSFLDG GNPFRFWLLE
IFNGNIIAIG LIPVLALIIY GVFRLTKGTV YA