Gene SeHA_C4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4042 
Symbol 
ID6489869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3925497 
End bp3926507 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content35% 
IMG OID642744143 
Productlipopolysaccharide 1,2-glucosyltransferase 
Protein accessionYP_002047748 
Protein GI194450584 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.436401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAT TTCCTGAGAT AGAAATAGCT GAATATAAAG TTTTTGATGA AAGTAATAAT 
AATGATGATA ACGTATTAAA CATTTCTTAT GGCGTTGATG AAAACTATCT TGATGGTGTG
GGGGTATCAA TCGCTTCAGT TGTATTAAAC AATAATATCC CGCTCGCTTT TCACATTATT
TGTGACTCAT ACTCCCCGTG TTTTGTAAAA TATATAGAGC GTTTAGCCGT ACAGCATCAC
ATAAAAATTT CTCTTTATCT TATTAAAGTA GAAAGCCTTG AGGTATTGCC TCAAACTAAA
GTATGGTCGA GAGCAATGTA TTTTCGTTTA TTTGCTTTCG ATTATCTCAG CAAGAAGGTA
AATACCTTAC TTTATTTGGA TGCCGATGTT GTATGCAAAG GATCTTTGCA AGATCTTTTA
CAGCTTGATC TGACAGAGAA GATCGCTGCG GTCGTAAAAG ATGTTGATTC CATCCAGAAT
AAGGTAAATG AGAGATTAAG CGCTTTTAAT TTACAAGGTG GTTATTTTAA CTCCGGCGTG
GTTTTTGTTA ACCTGAAATT ATGGAAAGAG AATGCCTTAA CCAAAAAGGC ATTTTTACTT
TTGGCAGGTA AAGAGGCTGA CTCTTTTAAA TATCCCGATC AGGATGTTTT GAATATTCTC
CTACAGGATA AAGTCATTTT TCTACCGCGA CCGTATAATA CTATTTATAC TATTAAAAGT
GAGTTGAAAG ATAAGTCACA TAAAAAATAT AGCAATATAA TTAATGATAA TACTATTTTA
ATTCATTATA CGGGCGCTAC AAAACCATGG CATGCCTGGG CAAATTATCC TTCAGTTATC
TATTATAAAA ATGCACGACT GAACTCGCCC TGGAAAGATT TTCCCGCAAA AGATGCGCGT
ACCATAGTCG AATTTAAGAA GCGATATAAA CATCTTCTCG TGCAAGGTCA TTATTTTAAA
GGCCTTCTGG CTGGAAGCGC ATATCTTTAT CGTAAACTTT TCCACAAATA A
 
Protein sequence
MDSFPEIEIA EYKVFDESNN NDDNVLNISY GVDENYLDGV GVSIASVVLN NNIPLAFHII 
CDSYSPCFVK YIERLAVQHH IKISLYLIKV ESLEVLPQTK VWSRAMYFRL FAFDYLSKKV
NTLLYLDADV VCKGSLQDLL QLDLTEKIAA VVKDVDSIQN KVNERLSAFN LQGGYFNSGV
VFVNLKLWKE NALTKKAFLL LAGKEADSFK YPDQDVLNIL LQDKVIFLPR PYNTIYTIKS
ELKDKSHKKY SNIINDNTIL IHYTGATKPW HAWANYPSVI YYKNARLNSP WKDFPAKDAR
TIVEFKKRYK HLLVQGHYFK GLLAGSAYLY RKLFHK