| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C4038 |
|---|
| Symbol | |
|---|
| ID | 6490253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 3921300 |
|---|
| End bp | 3922514 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642744139 |
|---|
| Product | O-antigen ligase |
|---|
| Protein accession | YP_002047744 |
|---|
| Protein GI | 194450945 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACCA CATCATTAAC GTTAAATAAA GAGAAATGGA AGCCGATCTG GAATAAAGCG
CTGGTTTTTC TTTTTGTTGC CACGTATTTT CTGGATGGTA TTACGCGTTA TAAACATTTG
ATAATCATAC TTATGGTTAT CACCGCGATT TATCAGGTCT CACGCTCACC GAAAAGTTTC
CCCCCTCTTT TCAAAAATAG CGTATTTTAT AGCGTAGCAG TATTATCATT AATCCTTGTT
TATTCCATAC TCATATCGCC AGATATGAAA GAAAGTTTCA AGGAATTTGA AAATACGGTA
CTGGAGGGCT TCTTATTATA TACTTTATTA ATTCCCGTAC TATTAAAAGA TGAAACAAAA
GAAACGGTTG CGAAAATAGT ACTTTTCTCC TTTTTAACAA GTTTAGGACT TCGCTGCCTT
GCAGAGAGTA TTCTGTATAT CGAGGACTAT AATAAAGGGA TTATGCCATT CATAAGCTAT
GCGCATCGAC ATATGTCCGA TTCCATGGTT TTCTTATTTC CAGCATTATT GAATATTTGG
CTGTTTAGAA AAAATGCAAT TAAGTTGGTT TTTTTGGTGC TTAGCGCCAT CTACCTTTTC
TTTATCCTGG GAACCCTATC GCGAGGGGCA TGGTTGGCGG TGCTTATAGT AGGTGTTCTG
TGGGCAATAC TGAACCGCCA ATGGAAGTTA ATAGGAGTTG GTGCCATTTT ATTAGCCATT
ATCGGCGCTT TGGTTATCAC TCAACATAAT AACAAACCAG ACCCAGAACA TTTACTGTAT
AAATTACAGC AGACAGATAG CTCATATCGT TATACTAACG GAACCCAGGG CACCGCGTGG
ATACTGATTC AGGAAAACCC GATCAAGGGC TACGGCTATG GTAATGATGT GTATGATGGT
GTTTATAATA AACGCGTTGT CGATTATCCA ACGTGGACCT TTAAAGAATC TATCGGTCCG
CATAATACCA TTCTGTACAT CTGGTTTAGT GCAGGCATAT TGGGTCTGGC GAGCCTGGTC
TATTTATATG GCGCTATCAT CAGGGAAACA GCCAGCTCTA CCCTCAGGAA AGTAGAGATA
AGCCCCTACA ATGCTCATCT CTTGCTATTT TTATCTTTCG TCGGTTTTTA TATCGTTCGT
GGCAATTTTG AACAGGTCGA TATTGCTCAA ATTGGTATCA TTACCGGTTT TCTGCTGGCG
CTAAGAAATA GATAA
|
|---|
| Protein sequence | MLTTSLTLNK EKWKPIWNKA LVFLFVATYF LDGITRYKHL IIILMVITAI YQVSRSPKSF
PPLFKNSVFY SVAVLSLILV YSILISPDMK ESFKEFENTV LEGFLLYTLL IPVLLKDETK
ETVAKIVLFS FLTSLGLRCL AESILYIEDY NKGIMPFISY AHRHMSDSMV FLFPALLNIW
LFRKNAIKLV FLVLSAIYLF FILGTLSRGA WLAVLIVGVL WAILNRQWKL IGVGAILLAI
IGALVITQHN NKPDPEHLLY KLQQTDSSYR YTNGTQGTAW ILIQENPIKG YGYGNDVYDG
VYNKRVVDYP TWTFKESIGP HNTILYIWFS AGILGLASLV YLYGAIIRET ASSTLRKVEI
SPYNAHLLLF LSFVGFYIVR GNFEQVDIAQ IGIITGFLLA LRNR
|
|---|
| |