Gene SeHA_C4015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4015 
Symbol 
ID6489606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3894280 
End bp3898623 
Gene Length4344 bp 
Protein Length1447 aa 
Translation table11 
GC content53% 
IMG OID642744116 
Productputative autotransporter 
Protein accessionYP_002047721 
Protein GI194447936 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures 
COG ID[COG5295] Autotransporter adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.84402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAA TATTTAAAGT CCTCTGGAAT GCCGCTACGG GAACATTTGT TGTCACCAGC 
GAAACCGCAA AAAGCCGCGG CAAAAAAAAC GGCCGCAGAA AGCTGGCGGT TTCCGCACTC
ATCGGTCTTA GCAGCATTAT GGTTTCTGCG GATGCACTGG CCAACGCAGG AAACGATACA
GGCGACGGCG TTACTCCAAC GGGTACCCAG ACTGGAGGAA AAGGGTGGAT TGCAATTGGT
ACCGATGCCA CAGCCAATAC TTACACCAAC GTTGATGGCG CAAGCGCCGC AATGGGTTAT
AAAGCCTCCG CGATGGGGAA ATGGAGTACC GCCATTGGTT CATACAGCCA GTCCACCGGC
GACTCTTCGT TAGCGCTTGG CGTAAAATCG GTTTCAGCCG GTGACCGGGC CATTGCAATG
GGCGCCTCAT CCTCAGCCAG TGGAAGTTAT TCAATGGCAA TGGGCGTGTA TGCCAATTCG
AGCGGCGCAA AATCGGTTGC GTTAGGTTAT AAATCTGTCG CGAGCGGAGC AACTTCCTCT
GCATTAGGTT ATCAAGCCAC TGCGAGCGGC GACGACAGCG CTGCATTTGG TAATGGCGCA
AAAGCGATAG GCACCAACTC AGTTGCCCTT GGCTCGGGCT CTGTCGCCCA GGAAGACAAT
TCCGTCGCCG TGGGTAACAG CACCACTCAG CGGCAGATCA CCTACGTTGC TAAAGGCGAC
ATCAATTCCA CCAGTACCGA TGCCGTTACA GGTGCGCAAA TTTATTCTTT AAGTCAATCC
GTCGCCGATC GACTCGGCGG AGGGGCTTCC GTTAATTCTG ATGGTACAGT GAATGCGCCC
CTCTACGAGG TAGGCACAGG CATCTACAAT AACGTAGGCA GTGCATTAAG CGCACTTAAC
ACTTCTATCA CTAACACAGA GGCCTCTGTC GCAGGATTAG CCGAAGACGC GCTGTTGTGG
GATGACAGCA CCAGCGCCTT TAGCGCTAGC CACACGGGAA ACGCCAGCAA AATCACCAAT
CTGGCGGCAG GCACCCTGGC CGCAGACAGC ACCGATGCCG TTAACGGCTC TCAGTTGTTT
GATACAAATG AGAAAGTGGA TAAGAACACT GCTGATATCG CCACCAATAC CGACAGCATT
AACCAGAACA CCACTGATAT CGCCGCCAAT ACGACCAGCA TCAATCAGAA CACTACTGAT
ATCGCCACCA ACACCACCAA TATCAACAGT CTGAGCGACT CCGTCACCAC GCTCACCGAT
GATGCCCTGC TTTGGGATGC AGCCTCTGGC GCATTCAGCG CTAAGCACAA CGGAAGCGAC
AGCAAAATCA CCAATCTGGC GGCGGGTACC CTGGCCGCTG ATAGCACCGA CGCCGTTAAC
GGCTCCCAGT TGTTTGATAC AAATGAGAAA GTGGATCAGA ACACCGCTGA TATCACCACC
AATACCAACA GCATCAATCA GAACACCACT GATATTGCCA CCAACACCAC CAATATCAAC
AACCTGAGCG ATTCCATCAC CACGCTCACC GATGATGCCC TGTTGTGGGA TGCAGCCTCT
GGCGCATTCA GCGCTAACCA CAACGGAAGC GCCAGCAAGA TCACCAATCT GGCGGCGGGT
ACCCTGGCTG CGGACAGCAC CGATGCCGTT AACGGCTCTC AGCTGTTTGC CACCAACGAA
AATGTGTCTC AGAACACCAC GGATATCGCT GCCAATACAA CCAGCATCAA TCAGAACACC
ACTGATATCG CCACCAACAC CACCAGCATC AACAACCTGA GCAATTCCAT CACCACGCTC
ACCGATGATG CCCTGTTATG GGATGCAGCC TCTGGCACAT TCAGCGCCAG CCGTAGCGGA
AGCGCCAGCA AGATCACCAA TCTGGCGGCG GGCACCCTGG CCGCGGACAG TACAGACGCG
GTAAACGGCT CCCAGTTGTA TGAAACCAAC CAGAGGGTGG ATCAAAACAC CTCTGCTATC
GCAGATATTA ATACGTCCAT CACCAATCTT AGCTCTGACA ACCTGAGCTG GAATGAGACA
ACGAGTTCGT TCTCTGCCAG CCACGGAAGT AGTACGACAA ACAAAATCAC CAACGTTGCT
GCCGGAGAGC TGTCTGAAGA AAGTACCGAC GCCGTTAACG GATCGCAGCT GTTCGAAACC
AATGAAAAAG TGGATCAGAA CACGACCGAT ATCGCCGCCA ATACCACTAA CATCACTCAG
AACAGCACCG CGATTGAGAA CCTGAATACT TCTGTCTCCG ACATTAATAC GTCCATTACC
GGCCTCACTG ATAACGCTCT GTTATGGGAC GAAGACATCG GCGCTTTCAG CGCAAACCAC
GGTGGAAGCA CCAGTAAAAT AACCAATGTC GCCGCCGGGG CGCTTTCTGA GGACAGTACA
GACGCGGTAA ACGGCTCACA GTTGTATGAA ACTAACCAGA AGGTGGATCA AAACACCTCT
GCTATCGCGG ATATCAATAC GTCCATCACC AATCTTGGTA CCGATGCACT GAGCTGGGAT
GACGAAGAAG GCGCGTTCAG CGCCAGCCAC GGTACCAGCG GTACCAATAA GATAACCAAT
GTGGCTGCAG GTGAAATCGC CAGTGACAGT ACTGACGCTG TTAATGGCTC TCAGCTCTAT
GAAACTAACA TGCTGATTTC TCAGTATAGT GAATCTATTA GCCAACTAGC CGGCGATACC
AGCGAAACCT ATATCACGGA AAATGGTACC GGCGTGAAAT ACATCCGTAC GAATGATAAT
GGGCTTGAAG GCCAGGATGC ATACGCAACG GGTAACGGCG CAACGGCAGT AGGTTACGAC
GCCGTCGCCT CTGGCGCTGG CAGTCTGGCT CTTGGCCAAA ACAGCAGCAG CAGCATTGAG
GGCAGTATCG CTTTGGGCAG TGGCTCCACC TCTAACCGCG CTATTACAAC CGGTATACGA
GAAACGAGCG TAACAAGCGA TGGCGTCGTC ATTGGCTACA ATACAACAGA CAGAAAGTTG
CTGGGCGCGT TGTCATTGGG GACGGATGGA GAAAGCTATC GTCAAATTAC CAACGTTGCT
GACGGCTCTG AAGCGCAAGA TGCGGTAACA GTTCGTCAGT TACAAAATGC CATTGGTGCG
GTCACTACTA CACCGACCAA GTACTACCAC GCAAACTCAA CGGAAGAAGA TTCACTGGCT
GTCGGAACTG ACTCACTGGC AATGGGTGCG AAGACCATCG TCAATGCTGA TGCAGGTATT
GGTATTGGTC TGAATACACT GGTGATGGCT GATGCCATCA ACGGTATTGC TATCGGTTCT
AACGCACGCG CCAATCATGC AAACAGTATT GCAATGGGTA ATGGTTCTCA GACCACTCGC
GGCGCACAGA CTGACTACAC CGCCTACAAC ATGGACACAC CGCAGAACTC TGTCGGTGAG
TTCTCTGTCG GCAGTGAAGA CGGTCAACGT CAGATCACTA ACGTCGCGGC GGGTTCGGCA
GATACCGATG CCGTTAACGT GAGTCAATTG AAAGTAACGG ACGCGCAGGT TTCCAGGAAT
ACCCAGAGCA TTACTAACCT GAATACTCAG GTATCGAATC TGGATACCCG CGTCACCAAT
ATCGAAAACG GCATTGGCGA TATCGTCACT ACCGGTAGCA CCAAGTACTT CAAGACCAAC
ACCGATGGCG CAGATGCAAA TGCCCAGGGT GCGGACAGCG TCGCGATTGG CTCTGGCTCT
ATTGCTGCCG CTGAAAACAG CGTGGCGTTA GGCACAAATT CCGTCGCAGA TGAAGCTAAT
ACTGTGTCTG TTGGCTCTTC TACTCAACAA CGCCGTATTA CCAACGTTGC CGCAGGGGTG
AACAACACTG ACGCGGTTAA TGTGGCGCAA CTGAAAGCCT CAGAAGCAGG CTCCGTGCGT
TATGAAACCA ATGCAGATGG CTCGGTTAAC TATAGCGTGC TCAACCTGGG AGACGGGAGT
GGCGGCACCA CTCGGATCGG CAATGTTTCA GCGGCGGTGA ATGATACGGA TGCGGTTAAC
TATGCGCAAT TGAAACGCAG CGTCGAAGAA GCAAACACCT ATACCGACCA GAAAATGGGG
GAAATGAACA GCAAAATCAA AGGAGTAGAA AACAAGATGA GCGGCGGTAT CGCTTCAGCG
ATGGCGATGG CCGGTCTGCC ACAAGCCTAC GCCCCGGGCG CCAACATGAC CTCGATTGCT
GGCGGTACGT TTAATGGTGA AAGTGCCGTC GCCATTGGTG TCTCCATGGT AAGTGAAAGC
GGGGGCTGGG TGTATAAATT GCAAGGAACC AGCAACAGCC AGGGCGATTA CTCTGCAGCT
ATTGGCGCGG GCTTCCAGTG GTAA
 
Protein sequence
MNRIFKVLWN AATGTFVVTS ETAKSRGKKN GRRKLAVSAL IGLSSIMVSA DALANAGNDT 
GDGVTPTGTQ TGGKGWIAIG TDATANTYTN VDGASAAMGY KASAMGKWST AIGSYSQSTG
DSSLALGVKS VSAGDRAIAM GASSSASGSY SMAMGVYANS SGAKSVALGY KSVASGATSS
ALGYQATASG DDSAAFGNGA KAIGTNSVAL GSGSVAQEDN SVAVGNSTTQ RQITYVAKGD
INSTSTDAVT GAQIYSLSQS VADRLGGGAS VNSDGTVNAP LYEVGTGIYN NVGSALSALN
TSITNTEASV AGLAEDALLW DDSTSAFSAS HTGNASKITN LAAGTLAADS TDAVNGSQLF
DTNEKVDKNT ADIATNTDSI NQNTTDIAAN TTSINQNTTD IATNTTNINS LSDSVTTLTD
DALLWDAASG AFSAKHNGSD SKITNLAAGT LAADSTDAVN GSQLFDTNEK VDQNTADITT
NTNSINQNTT DIATNTTNIN NLSDSITTLT DDALLWDAAS GAFSANHNGS ASKITNLAAG
TLAADSTDAV NGSQLFATNE NVSQNTTDIA ANTTSINQNT TDIATNTTSI NNLSNSITTL
TDDALLWDAA SGTFSASRSG SASKITNLAA GTLAADSTDA VNGSQLYETN QRVDQNTSAI
ADINTSITNL SSDNLSWNET TSSFSASHGS STTNKITNVA AGELSEESTD AVNGSQLFET
NEKVDQNTTD IAANTTNITQ NSTAIENLNT SVSDINTSIT GLTDNALLWD EDIGAFSANH
GGSTSKITNV AAGALSEDST DAVNGSQLYE TNQKVDQNTS AIADINTSIT NLGTDALSWD
DEEGAFSASH GTSGTNKITN VAAGEIASDS TDAVNGSQLY ETNMLISQYS ESISQLAGDT
SETYITENGT GVKYIRTNDN GLEGQDAYAT GNGATAVGYD AVASGAGSLA LGQNSSSSIE
GSIALGSGST SNRAITTGIR ETSVTSDGVV IGYNTTDRKL LGALSLGTDG ESYRQITNVA
DGSEAQDAVT VRQLQNAIGA VTTTPTKYYH ANSTEEDSLA VGTDSLAMGA KTIVNADAGI
GIGLNTLVMA DAINGIAIGS NARANHANSI AMGNGSQTTR GAQTDYTAYN MDTPQNSVGE
FSVGSEDGQR QITNVAAGSA DTDAVNVSQL KVTDAQVSRN TQSITNLNTQ VSNLDTRVTN
IENGIGDIVT TGSTKYFKTN TDGADANAQG ADSVAIGSGS IAAAENSVAL GTNSVADEAN
TVSVGSSTQQ RRITNVAAGV NNTDAVNVAQ LKASEAGSVR YETNADGSVN YSVLNLGDGS
GGTTRIGNVS AAVNDTDAVN YAQLKRSVEE ANTYTDQKMG EMNSKIKGVE NKMSGGIASA
MAMAGLPQAY APGANMTSIA GGTFNGESAV AIGVSMVSES GGWVYKLQGT SNSQGDYSAA
IGAGFQW