Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4015 |
Symbol | |
ID | 6489606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 3894280 |
End bp | 3898623 |
Gene Length | 4344 bp |
Protein Length | 1447 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642744116 |
Product | putative autotransporter |
Protein accession | YP_002047721 |
Protein GI | 194447936 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport [W] Extracellular structures |
COG ID | [COG5295] Autotransporter adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.84402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGAA TATTTAAAGT CCTCTGGAAT GCCGCTACGG GAACATTTGT TGTCACCAGC GAAACCGCAA AAAGCCGCGG CAAAAAAAAC GGCCGCAGAA AGCTGGCGGT TTCCGCACTC ATCGGTCTTA GCAGCATTAT GGTTTCTGCG GATGCACTGG CCAACGCAGG AAACGATACA GGCGACGGCG TTACTCCAAC GGGTACCCAG ACTGGAGGAA AAGGGTGGAT TGCAATTGGT ACCGATGCCA CAGCCAATAC TTACACCAAC GTTGATGGCG CAAGCGCCGC AATGGGTTAT AAAGCCTCCG CGATGGGGAA ATGGAGTACC GCCATTGGTT CATACAGCCA GTCCACCGGC GACTCTTCGT TAGCGCTTGG CGTAAAATCG GTTTCAGCCG GTGACCGGGC CATTGCAATG GGCGCCTCAT CCTCAGCCAG TGGAAGTTAT TCAATGGCAA TGGGCGTGTA TGCCAATTCG AGCGGCGCAA AATCGGTTGC GTTAGGTTAT AAATCTGTCG CGAGCGGAGC AACTTCCTCT GCATTAGGTT ATCAAGCCAC TGCGAGCGGC GACGACAGCG CTGCATTTGG TAATGGCGCA AAAGCGATAG GCACCAACTC AGTTGCCCTT GGCTCGGGCT CTGTCGCCCA GGAAGACAAT TCCGTCGCCG TGGGTAACAG CACCACTCAG CGGCAGATCA CCTACGTTGC TAAAGGCGAC ATCAATTCCA CCAGTACCGA TGCCGTTACA GGTGCGCAAA TTTATTCTTT AAGTCAATCC GTCGCCGATC GACTCGGCGG AGGGGCTTCC GTTAATTCTG ATGGTACAGT GAATGCGCCC CTCTACGAGG TAGGCACAGG CATCTACAAT AACGTAGGCA GTGCATTAAG CGCACTTAAC ACTTCTATCA CTAACACAGA GGCCTCTGTC GCAGGATTAG CCGAAGACGC GCTGTTGTGG GATGACAGCA CCAGCGCCTT TAGCGCTAGC CACACGGGAA ACGCCAGCAA AATCACCAAT CTGGCGGCAG GCACCCTGGC CGCAGACAGC ACCGATGCCG TTAACGGCTC TCAGTTGTTT GATACAAATG AGAAAGTGGA TAAGAACACT GCTGATATCG CCACCAATAC CGACAGCATT AACCAGAACA CCACTGATAT CGCCGCCAAT ACGACCAGCA TCAATCAGAA CACTACTGAT ATCGCCACCA ACACCACCAA TATCAACAGT CTGAGCGACT CCGTCACCAC GCTCACCGAT GATGCCCTGC TTTGGGATGC AGCCTCTGGC GCATTCAGCG CTAAGCACAA CGGAAGCGAC AGCAAAATCA CCAATCTGGC GGCGGGTACC CTGGCCGCTG ATAGCACCGA CGCCGTTAAC GGCTCCCAGT TGTTTGATAC AAATGAGAAA GTGGATCAGA ACACCGCTGA TATCACCACC AATACCAACA GCATCAATCA GAACACCACT GATATTGCCA CCAACACCAC CAATATCAAC AACCTGAGCG ATTCCATCAC CACGCTCACC GATGATGCCC TGTTGTGGGA TGCAGCCTCT GGCGCATTCA GCGCTAACCA CAACGGAAGC GCCAGCAAGA TCACCAATCT GGCGGCGGGT ACCCTGGCTG CGGACAGCAC CGATGCCGTT AACGGCTCTC AGCTGTTTGC CACCAACGAA AATGTGTCTC AGAACACCAC GGATATCGCT GCCAATACAA CCAGCATCAA TCAGAACACC ACTGATATCG CCACCAACAC CACCAGCATC AACAACCTGA GCAATTCCAT CACCACGCTC ACCGATGATG CCCTGTTATG GGATGCAGCC TCTGGCACAT TCAGCGCCAG CCGTAGCGGA AGCGCCAGCA AGATCACCAA TCTGGCGGCG GGCACCCTGG CCGCGGACAG TACAGACGCG GTAAACGGCT CCCAGTTGTA TGAAACCAAC CAGAGGGTGG ATCAAAACAC CTCTGCTATC GCAGATATTA ATACGTCCAT CACCAATCTT AGCTCTGACA ACCTGAGCTG GAATGAGACA ACGAGTTCGT TCTCTGCCAG CCACGGAAGT AGTACGACAA ACAAAATCAC CAACGTTGCT GCCGGAGAGC TGTCTGAAGA AAGTACCGAC GCCGTTAACG GATCGCAGCT GTTCGAAACC AATGAAAAAG TGGATCAGAA CACGACCGAT ATCGCCGCCA ATACCACTAA CATCACTCAG AACAGCACCG CGATTGAGAA CCTGAATACT TCTGTCTCCG ACATTAATAC GTCCATTACC GGCCTCACTG ATAACGCTCT GTTATGGGAC GAAGACATCG GCGCTTTCAG CGCAAACCAC GGTGGAAGCA CCAGTAAAAT AACCAATGTC GCCGCCGGGG CGCTTTCTGA GGACAGTACA GACGCGGTAA ACGGCTCACA GTTGTATGAA ACTAACCAGA AGGTGGATCA AAACACCTCT GCTATCGCGG ATATCAATAC GTCCATCACC AATCTTGGTA CCGATGCACT GAGCTGGGAT GACGAAGAAG GCGCGTTCAG CGCCAGCCAC GGTACCAGCG GTACCAATAA GATAACCAAT GTGGCTGCAG GTGAAATCGC CAGTGACAGT ACTGACGCTG TTAATGGCTC TCAGCTCTAT GAAACTAACA TGCTGATTTC TCAGTATAGT GAATCTATTA GCCAACTAGC CGGCGATACC AGCGAAACCT ATATCACGGA AAATGGTACC GGCGTGAAAT ACATCCGTAC GAATGATAAT GGGCTTGAAG GCCAGGATGC ATACGCAACG GGTAACGGCG CAACGGCAGT AGGTTACGAC GCCGTCGCCT CTGGCGCTGG CAGTCTGGCT CTTGGCCAAA ACAGCAGCAG CAGCATTGAG GGCAGTATCG CTTTGGGCAG TGGCTCCACC TCTAACCGCG CTATTACAAC CGGTATACGA GAAACGAGCG TAACAAGCGA TGGCGTCGTC ATTGGCTACA ATACAACAGA CAGAAAGTTG CTGGGCGCGT TGTCATTGGG GACGGATGGA GAAAGCTATC GTCAAATTAC CAACGTTGCT GACGGCTCTG AAGCGCAAGA TGCGGTAACA GTTCGTCAGT TACAAAATGC CATTGGTGCG GTCACTACTA CACCGACCAA GTACTACCAC GCAAACTCAA CGGAAGAAGA TTCACTGGCT GTCGGAACTG ACTCACTGGC AATGGGTGCG AAGACCATCG TCAATGCTGA TGCAGGTATT GGTATTGGTC TGAATACACT GGTGATGGCT GATGCCATCA ACGGTATTGC TATCGGTTCT AACGCACGCG CCAATCATGC AAACAGTATT GCAATGGGTA ATGGTTCTCA GACCACTCGC GGCGCACAGA CTGACTACAC CGCCTACAAC ATGGACACAC CGCAGAACTC TGTCGGTGAG TTCTCTGTCG GCAGTGAAGA CGGTCAACGT CAGATCACTA ACGTCGCGGC GGGTTCGGCA GATACCGATG CCGTTAACGT GAGTCAATTG AAAGTAACGG ACGCGCAGGT TTCCAGGAAT ACCCAGAGCA TTACTAACCT GAATACTCAG GTATCGAATC TGGATACCCG CGTCACCAAT ATCGAAAACG GCATTGGCGA TATCGTCACT ACCGGTAGCA CCAAGTACTT CAAGACCAAC ACCGATGGCG CAGATGCAAA TGCCCAGGGT GCGGACAGCG TCGCGATTGG CTCTGGCTCT ATTGCTGCCG CTGAAAACAG CGTGGCGTTA GGCACAAATT CCGTCGCAGA TGAAGCTAAT ACTGTGTCTG TTGGCTCTTC TACTCAACAA CGCCGTATTA CCAACGTTGC CGCAGGGGTG AACAACACTG ACGCGGTTAA TGTGGCGCAA CTGAAAGCCT CAGAAGCAGG CTCCGTGCGT TATGAAACCA ATGCAGATGG CTCGGTTAAC TATAGCGTGC TCAACCTGGG AGACGGGAGT GGCGGCACCA CTCGGATCGG CAATGTTTCA GCGGCGGTGA ATGATACGGA TGCGGTTAAC TATGCGCAAT TGAAACGCAG CGTCGAAGAA GCAAACACCT ATACCGACCA GAAAATGGGG GAAATGAACA GCAAAATCAA AGGAGTAGAA AACAAGATGA GCGGCGGTAT CGCTTCAGCG ATGGCGATGG CCGGTCTGCC ACAAGCCTAC GCCCCGGGCG CCAACATGAC CTCGATTGCT GGCGGTACGT TTAATGGTGA AAGTGCCGTC GCCATTGGTG TCTCCATGGT AAGTGAAAGC GGGGGCTGGG TGTATAAATT GCAAGGAACC AGCAACAGCC AGGGCGATTA CTCTGCAGCT ATTGGCGCGG GCTTCCAGTG GTAA
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Protein sequence | MNRIFKVLWN AATGTFVVTS ETAKSRGKKN GRRKLAVSAL IGLSSIMVSA DALANAGNDT GDGVTPTGTQ TGGKGWIAIG TDATANTYTN VDGASAAMGY KASAMGKWST AIGSYSQSTG DSSLALGVKS VSAGDRAIAM GASSSASGSY SMAMGVYANS SGAKSVALGY KSVASGATSS ALGYQATASG DDSAAFGNGA KAIGTNSVAL GSGSVAQEDN SVAVGNSTTQ RQITYVAKGD INSTSTDAVT GAQIYSLSQS VADRLGGGAS VNSDGTVNAP LYEVGTGIYN NVGSALSALN TSITNTEASV AGLAEDALLW DDSTSAFSAS HTGNASKITN LAAGTLAADS TDAVNGSQLF DTNEKVDKNT ADIATNTDSI NQNTTDIAAN TTSINQNTTD IATNTTNINS LSDSVTTLTD DALLWDAASG AFSAKHNGSD SKITNLAAGT LAADSTDAVN GSQLFDTNEK VDQNTADITT NTNSINQNTT DIATNTTNIN NLSDSITTLT DDALLWDAAS GAFSANHNGS ASKITNLAAG TLAADSTDAV NGSQLFATNE NVSQNTTDIA ANTTSINQNT TDIATNTTSI NNLSNSITTL TDDALLWDAA SGTFSASRSG SASKITNLAA GTLAADSTDA VNGSQLYETN QRVDQNTSAI ADINTSITNL SSDNLSWNET TSSFSASHGS STTNKITNVA AGELSEESTD AVNGSQLFET NEKVDQNTTD IAANTTNITQ NSTAIENLNT SVSDINTSIT GLTDNALLWD EDIGAFSANH GGSTSKITNV AAGALSEDST DAVNGSQLYE TNQKVDQNTS AIADINTSIT NLGTDALSWD DEEGAFSASH GTSGTNKITN VAAGEIASDS TDAVNGSQLY ETNMLISQYS ESISQLAGDT SETYITENGT GVKYIRTNDN GLEGQDAYAT GNGATAVGYD AVASGAGSLA LGQNSSSSIE GSIALGSGST SNRAITTGIR ETSVTSDGVV IGYNTTDRKL LGALSLGTDG ESYRQITNVA DGSEAQDAVT VRQLQNAIGA VTTTPTKYYH ANSTEEDSLA VGTDSLAMGA KTIVNADAGI GIGLNTLVMA DAINGIAIGS NARANHANSI AMGNGSQTTR GAQTDYTAYN MDTPQNSVGE FSVGSEDGQR QITNVAAGSA DTDAVNVSQL KVTDAQVSRN TQSITNLNTQ VSNLDTRVTN IENGIGDIVT TGSTKYFKTN TDGADANAQG ADSVAIGSGS IAAAENSVAL GTNSVADEAN TVSVGSSTQQ RRITNVAAGV NNTDAVNVAQ LKASEAGSVR YETNADGSVN YSVLNLGDGS GGTTRIGNVS AAVNDTDAVN YAQLKRSVEE ANTYTDQKMG EMNSKIKGVE NKMSGGIASA MAMAGLPQAY APGANMTSIA GGTFNGESAV AIGVSMVSES GGWVYKLQGT SNSQGDYSAA IGAGFQW
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