Gene SeHA_C3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3950 
SymboldppA 
ID6490016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3827528 
End bp3829108 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content52% 
IMG OID642744054 
Productdipeptide ABC transporter periplasmic dipeptide-binding protein 
Protein accessionYP_002047660 
Protein GI194451092 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC TTGGTTTGAG CCTGGTGGCC ATGACCGTTG CAGCAAGCGT GCAGGCCAAA 
ACCCTGGTTT ATTGTTCAGA AGGCTCGCCG GAAGGCTTTA ACCCACAGCT CTTTACGTCT
GGCACCACCT ATGATGCCAG CTCCGTACCT ATCTATAACC GTCTGGTTGA ATTCAAAACC
GGCACCACGG AAGTGATCCC GGGTCTTGCT GAGAAGTGGG ATATCAGCGA AGACGGTAAA
ACCTATACGT TCCACCTACG TAAAGGGGTG AAATGGCAAT CCAGCAAGGA TTTCAAACCC
ACGCGCGAGC TGAACGCTGA TGATGTCGTG TTCTCTTTTG ACCGGCAGAA AAATGAGCAG
AACCCGTACC ATAAAGTGTC TGGCGGCAGC TATGAATACT TTGAAGGCAT GGGGCTGCCG
GATCTGATTA GCGAAGTGAA GAAGGTAGAC GATCACACGG TGCAGTTTGT GCTGACGCGT
CCGGAAGCGC CGTTCCTTGC CGATTTAGCC ATGGACTTCG CCTCTATTCT TTCCAAAGAA
TATGCTGACA ACATGCTGAA AGCCGGTACG CCGGAAAAAG TGGATCTGAA CCCGGTCGGC
ACTGGCCCGT TCCAACTGGT GCAATATCAG AAAGACTCCC GCATTCTCTA CAAAGCCTTT
GACGGCTACT GGGGCACGAA GCCGCAGATT GACCGTCTGG TCTTCTCCAT CACGCCTGAC
GCCTCTGTGC GTTACGCCAA ACTGCAGAAG AACGAATGTC AGGTGATGCC GTATCCGAAC
CCGGCGGATA TTGCGCGCAT GAAAGAAGAT AAAAACATCA ACCTGATGGA GCAGGCCGGT
CTGAACGTGG GTTATCTCTC CTATAACGTG CAGAAAAAAC CGCTGGATGA CGTCAAAGTT
CGCCAGGCGT TGACCTATGC CGTGAATAAA GAGGCCATCA TTAAAGCCGT TTATCAGGGC
GCGGGCGTTG CGGCGAAAAA CCTGATCCCG CCGACAATGT GGGGTTACAA CGACGATATT
AAAGACTATG GCTACGATCC GGAAAAAGCG AAGGCGCTGC TGAAAGAAGC CGGTCTGGAA
AAAGGCTTCA CCATCGATCT GTGGGCGATG CCGGTACAGC GTCCCTATAA CCCGAATGCG
CGTCGTATGG CGGAAATGAT CCAGGCGGAC TGGGCGAAGA TTGGCGTTCA GGCCAAAATT
GTCACCTATG AATGGGGCGA ATACCTCAAG CGCGCTAAAG ATGGCGAGCA CCAGACGGTG
ATGATGGGCT GGACCGGCGA TAATGGCGAT CCGGATAACT TCTTCGCCAC GCTGTTCAGC
TGCGATGCCG CCCAGCAAGG CTCCAACTAT TCAAAATGGT GCTACAAGCC GTTTGAAGAC
CTGATTCAGC CTGCGCGTGC GACCGATGAC CACAACAAGC GTATTGAACT CTATAAACAG
GCCCAGGTTG TGATGCATGA CCAGGCGCCA GCGCTGATCA TCGCTCACTC CACGGTTTAT
GAGCCAGTGC GTAAAGAAGT TAAAGGCTAT GTGGTTGATC CATTAGGCAA ACATCACTTC
GAAAACGTCT CTGTCGAATA A
 
Protein sequence
MLKLGLSLVA MTVAASVQAK TLVYCSEGSP EGFNPQLFTS GTTYDASSVP IYNRLVEFKT 
GTTEVIPGLA EKWDISEDGK TYTFHLRKGV KWQSSKDFKP TRELNADDVV FSFDRQKNEQ
NPYHKVSGGS YEYFEGMGLP DLISEVKKVD DHTVQFVLTR PEAPFLADLA MDFASILSKE
YADNMLKAGT PEKVDLNPVG TGPFQLVQYQ KDSRILYKAF DGYWGTKPQI DRLVFSITPD
ASVRYAKLQK NECQVMPYPN PADIARMKED KNINLMEQAG LNVGYLSYNV QKKPLDDVKV
RQALTYAVNK EAIIKAVYQG AGVAAKNLIP PTMWGYNDDI KDYGYDPEKA KALLKEAGLE
KGFTIDLWAM PVQRPYNPNA RRMAEMIQAD WAKIGVQAKI VTYEWGEYLK RAKDGEHQTV
MMGWTGDNGD PDNFFATLFS CDAAQQGSNY SKWCYKPFED LIQPARATDD HNKRIELYKQ
AQVVMHDQAP ALIIAHSTVY EPVRKEVKGY VVDPLGKHHF ENVSVE