| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3935 |
|---|
| Symbol | bcsA |
|---|
| ID | 6489896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3813959 |
|---|
| End bp | 3816583 |
|---|
| Gene Length | 2625 bp |
|---|
| Protein Length | 874 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642744041 |
|---|
| Product | cellulose synthase catalytic subunit |
|---|
| Protein accession | YP_002047647 |
|---|
| Protein GI | 194447581 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03030] cellulose synthase catalytic subunit (UDP-forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0933136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 0.932976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCC TTTCCCGGTG GCTGCTTATC CCGCCGGTTA GCGCGCGTTT GAGCGAGCGC
TATCAGGGTT ACCGCCGCCA CGGCGCGTCG CCGTTTAGCG CAGCGCTCGG CTGCCTGTGG
ATGATTCTGG CGTGGATAGT GTTTCCGCTT GAGCATCCGC GCTGGCAGCG TATTCGCGAC
GGGCATAAAG CGCTTTATCC GCATATTAAC GCCGCCCGCC CGCGCCCGCT GGACCCGGCC
CGTTACCTCA TTCAGACCCT CTGGCTGGTG ATGATCTCGT CGACTAAAGA ACGTCATGAA
CCGCGCTGGC GGTCATTTGC GCGCCTGAAG GACGTTCGTG GACGTTACCA TCAATGGATG
GATACCTTAC CGGAACGGGT GCGCCAAAAG ACAACGCATC TGGAAAAGGA AAAAGAGCTG
GGACATCTTA GCAACGGCGC CCGGCGTTTT ATTCTGGGCG TTATCGTGAC CTTTTCACTG
ATACTGGCGC TGATCTGTAT TACGCAGCCA TTTAACCCGC TATCGCAATT TATCTTTCTG
CTGTTGCTGT GGGGCGTTGC GCTGTTGGTA CGACGTATGC CGGGACGCTT TTCCGCGCTG
ATGCTCATCG TGCTGTCGCT AACGGTCTCC TGTCGTTATA TCTGGTGGCG CTATACCTCG
ACGCTAAATT GGGACGACCC GGTCAGTCTG GTGTGCGGGC TGATTCTGCT GTTTGCGGAA
ACCTACGCCT GGATTGTGCT GGTGCTGGGG TACTTCCAGG TGGTGTGGCC GTTAAATCGT
CAACCGGTGC CGTTGCCGAA AGAAATGTCG CAGTGGCCGA CGGTGGATAT TTTTGTACCG
ACCTATAACG AAGACCTTAA TGTGGTCAAA AATACCATTT ACGCTTCGCT TGGCATTGAC
TGGCCGAAGG ACAAGCTGAA TATCTGGATC CTTGATGACG GCGGGCGTGA ATCATTTCGT
CATTTTGCCC GACATGTTGG CGTGCATTAC ATTGCCCGCA CCACGCATGA ACACGCCAAA
GCCGGCAACA TCAACAATGC GCTAAAACAC GCGAAAGGCG AGTTTGTGGC GATCTTCGAT
TGCGACCATG TGCCGACACG CTCGTTTCTG CAAATGACAA TGGGCTGGTT CCTGAAAGAA
AAACAGCTGG CGATGATGCA GACGCCGCAT CATTTCTTCT CCCCGGACCC GTTTGAGCGC
AACCTGGGAC GTTTTCGTAA AACGCCTAAC GAAGGCACGC TGTTTTACGG ACTGGTGCAG
GACGGTAACG ATATGTGGGA CGCCACTTTC TTTTGCGGAT CGTGCGCGGT GATTCGCCGT
AAGCCGCTGG ATGAGATTGG CGGTATCGCC GTTGAGACGG TGACGGAAGA TGCGCATACT
TCGCTCCGGC TGCACCGGCG AGGTTATACC TCAGCGTATA TGCGCATTCC GCAGGCGGCG
GGGCTGGCGA CGGAAAGCCT GTCGGCGCAT ATCGGGCAGC GTATTCGTTG GGCGCGGGGC
ATGGTGCAAA TTTTCCGCCT CGATAACCCT CTGTTTGGTA AAGGCTTAAA ACTGGCGCAG
CGGCTGTGCT ACCTCAACGC GATGTTCCAT TTCTTGTCCG GCATTCCGCG CCTGATCTTT
CTGACCGCGC CGCTGGCTTT TCTGCTGCTG CACGCCTATA TCATTTATGC GCCTGCGTTG
ATGATTGCGC TATTTGTGAT ACCGCACATG GTCCACGCCA GCCTGACTAA CTCGAAGATT
CAGGGCAAGT ATCGTCACTC TTTCTGGAGT GAAATCTATG AAACGGTACT GGCATGGTAT
ATCGCACCGC CGACTCTGGT CGCGTTGATC AATCCGCACA AAGGGAAATT TAACGTCACG
GCGAAAGGCG GGCTGGTGGA AGAGAAGTAC GTCGACTGGG TAATCTCGCG TCCGTATATC
TTCCTTGTCT TGCTTAACCT GCTCGGCGTG GCGGCGGGCG TATGGCGATA CTATTACGGG
CCGGAAAATG AAACGCTGAC CGTCATCGTT AGCCTGGTGT GGGTCTTCTA TAACCTGGTC
ATTCTCGGCG GCGCGGTTGC GGTTTCGGTA GAGAGTAAAC AGGTCAGGCG CGCGCATCGG
GTCGAGATTG CCATGCCGGG GGCCATCGCC CGCGAAGATG GACATTTGTT CTCCTGTACC
GTACATGACT TCTCCGACGG CGGGTTAGGC ATCAAGATCA ACGGTCAGGC GCAGGTGCTG
GAAGGGCAGA AAGTGAATCT GTTGCTTAAA CGCGGGCAGC AGGAATATGT CTTTCCAACG
CAGGTGGTGC GCGTAACGGG CAATGAGGTC GGACTACAAC TGATGCCGCT CACCACCAAA
CAACATATTG ATTTTGTGCA GTGTACCTTC GCGCGCGCCG ATACGTGGGC GCTTTGGCAA
GATAGCTTCC CGGAAGATAA ACCGCTGGAA AGCTTGCTGG ATATTCTGAA GCTGGGCTTC
CGCGGATATC GCCACCTCGC GGAATTCGCG CCGCCTTCAG TAAAAGTAAT TTTCCGATCG
TTGACGGCGT TAATTGCCTG GATTGTATCG TTTATTCCGC GTCGCCCGGA GCGGCAAGCG
GCGATACAGC CGTCGGATCG GGTTATGGCT CAGGCTCAAC AATGA
|
|---|
| Protein sequence | MSALSRWLLI PPVSARLSER YQGYRRHGAS PFSAALGCLW MILAWIVFPL EHPRWQRIRD
GHKALYPHIN AARPRPLDPA RYLIQTLWLV MISSTKERHE PRWRSFARLK DVRGRYHQWM
DTLPERVRQK TTHLEKEKEL GHLSNGARRF ILGVIVTFSL ILALICITQP FNPLSQFIFL
LLLWGVALLV RRMPGRFSAL MLIVLSLTVS CRYIWWRYTS TLNWDDPVSL VCGLILLFAE
TYAWIVLVLG YFQVVWPLNR QPVPLPKEMS QWPTVDIFVP TYNEDLNVVK NTIYASLGID
WPKDKLNIWI LDDGGRESFR HFARHVGVHY IARTTHEHAK AGNINNALKH AKGEFVAIFD
CDHVPTRSFL QMTMGWFLKE KQLAMMQTPH HFFSPDPFER NLGRFRKTPN EGTLFYGLVQ
DGNDMWDATF FCGSCAVIRR KPLDEIGGIA VETVTEDAHT SLRLHRRGYT SAYMRIPQAA
GLATESLSAH IGQRIRWARG MVQIFRLDNP LFGKGLKLAQ RLCYLNAMFH FLSGIPRLIF
LTAPLAFLLL HAYIIYAPAL MIALFVIPHM VHASLTNSKI QGKYRHSFWS EIYETVLAWY
IAPPTLVALI NPHKGKFNVT AKGGLVEEKY VDWVISRPYI FLVLLNLLGV AAGVWRYYYG
PENETLTVIV SLVWVFYNLV ILGGAVAVSV ESKQVRRAHR VEIAMPGAIA REDGHLFSCT
VHDFSDGGLG IKINGQAQVL EGQKVNLLLK RGQQEYVFPT QVVRVTGNEV GLQLMPLTTK
QHIDFVQCTF ARADTWALWQ DSFPEDKPLE SLLDILKLGF RGYRHLAEFA PPSVKVIFRS
LTALIAWIVS FIPRRPERQA AIQPSDRVMA QAQQ
|
|---|
| |