Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3898 |
Symbol | |
ID | 6489110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3766072 |
End bp | 3768813 |
Gene Length | 2742 bp |
Protein Length | 913 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642744005 |
Product | ABC transporter permease and ATP-binding protein |
Protein accession | YP_002047611 |
Protein GI | 194451873 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 98 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCGC TGAAGCTGGT GCCTGTTCCT CCCGTGGCGC AGCTTGAGGG GGTGAGCCAG CATTACGGAA AAACAGCCGC GCTGAACAAT ATCACGCTGG ACATTCCCGC CCGTAGTATG GTCGGGCTGA TTGGTCCGGA CGGGGTGGGT AAGTCGAGCC TGCTGTCGCT GATTTCTGGC GCGCGGGTGA TTGAGCAAGG GAACGTTATC GTCCTGGGCG GGGATATGCG CGATGCGAAA CATCGCCGCG ACGTCTGTCC GCGCATCGCC TGGATGCCGC AGGGGCTGGG GAAAAACCTT TATCACACGT TATCGGTTTA TGAGAACGTC GAGTTTTTCG CTCGTCTCTT TGGTCATGAC AAAGCTGAAC GCGAAGCGCG TATTACCGAG CTGCTGAACA GCACCGGCCT GGCGCCGTTT CGTGACCGTC CTGCCGGGAA GCTGTCCGGT GGGATGAAAC AAAAGCTGGG GCTGTGCTGT GCGCTGATTC ATGACCCGGA ATTGCTGATT CTTGATGAGC CTACCACCGG CGTGGACCCG CTCTCCCGCG CTCAGTTCTG GGACTTAATC GACAGTATCC GCCAACGGCA GACCAATATG AGCGTGTTGG TCGCAACGGC CTATATGGAA GAGGCGGAGC GTTTTGACTG GCTGGTGGCG ATGAATGCGG GCGAGATACT GGCAACCGGC AGCGCGCAGC AACTGCGGGC AAAAACCCAT AGCGCGACGC TGGAACAGGC GTTTATCGCC CTGTTGCCAG AAGCGCAGCG CCAGGCGCAT AAGCCAGTGG TGATCCCGCC GTATCACGCT GAGCAGGAAG AGATTGCCAT TGAGGCGAAA GATCTGACCA TGCGCTTCGG TAAGTTCGTC GCGGTTGACC ATGTTAATTT CCGCATTCCG CGCGGCGAGA TTTTTGGCTT CCTCGGTTCA AACGGTTGCG GCAAATCGAC CACCATGAAA ATGCTGACCG GTCTGCTTCC CGCCAGCGAA GGCCAGGCCT GGCTATTTGG CCAGCCGGTA GACCCGAACG ACATCGATAC CCGTCGCCGG GTCGGGTATA TGTCGCAGGC TTTTTCGCTC TATAACGAAC TCACCGTGCG GCAGAATCTG GAACTTCATG CCCGCCTGTT TCATATTCCG CCAGCGGAGA TCCCGGCGCG CGTCGCGCAG ATGATCGAAC GCTTTATGCT AACGGAGGTG GAAGATACGC TCCCCGCTTC GTTGCCGCTC GGTATCCGCC AGCGTTTATC GCTGGCGGTA GCGGTGATCC ATCGCCCGGA AATGCTGATT CTTGATGAGC CAACGTCCGG CGTTGATCCG GTCGCCAGGG ATATGTTCTG GCAGCTTATG GTCGATCTTT CGCGTCAGGA TAAGGTGACG ATTTTTATCT CGACCCATTT TATGAACGAA GCGGAACGTT GCGACCGAAT GTCATTGATG CACGCCGGTA AAGTGCTCGC CAGCGGTACG CCGCAGGAAT TGGTGCAACA GCGGGGCGCG GCCAATCTGG AAGCGGCGTT TATTTCCTGG CTACAGGAAG CTGCGGGAGC GGCGCCTGAA ACCCCAATAC CGCCATCCCA GACGCCCGCC GCGTCAGGTA AACCGTCGCG GCAGGGATTG AGCTTCCGGC GTTTGTTCAG CTACAGTCGC CGCGAAGCGC TGGAGCTACG CCGCGATCCG GTACGCTCGA CGCTGGCGCT GCTGGGAACG GTAATTCTGA TGCTGATTAT GGGCTATGGC ATCAGTATGG ACGTGGAGAA CTTGCGTTTT GCCGTACTCG ACCGCGATCA AACCGTCAGC AGCCAGGCAT GGTCGCTCAA TCTGGCGGGA TCGCGCTATT TTATCGAACA GCCGCCGCTC GCCAGCTATG ACGAGCTTGA CCGGCGGATG CGTTCGGGAG AGTTGGCGGT TGCCATTGAG ATCCCGCCTA ATTTTGGCCG CGATATTGCT CGCGGTACGC CAGCGCAGAT TGGCGTCTGG GTGGATGGCG CCATGCCCAG CCGCGCCGAG ACGGTGAAGG GGTACGTTCA GGCGATGCAC CAAAGCTGGC TGCAGGAGGC GGCAAGTCGT CAGCCGAACC CGGTTAAACA GGCCGGGCTG CTCAACATTG AAACGCGCTA TCGTTATAAC CCGGATGTGA AAAGTCTGCC CGCTATCGTT CCGGCGGTCA TTCCGCTGCT GCTCATGATG ATCCCGTCAA TGCTTAGTGC CCTGAGCGTG GTGCGGGAGA AAGAGCTGGG GTCGATGATT AATCTGTACG TAACGCCGAC GACGCGCAGC GAATTTTTGC TGGGTAAACA ACTGCCGTAT ATCGCGCTGG GTATGCTGAA CTTCTTGCTA CTGTGCGCGC TGTCGGTCTT TGTGTTCGGC GTGCCGCTGA AAGGCAGCTT TCTCACGCTT ACCCTCGCGG CGCTGCTTTA CGTCATCATC GCCACCGGTC TGGGGCTGCT GATCTCCACG TTTATGAAGA GCCAAATCGC CGCTATTTTT GGGACGTCGA TTATTACCCT CATTCCGGCA ACACAATTTT CCGGCATGAT CGATCCGGTG GCTTCGCTGG AAGGACCGGG AAGATGGATC GGTGAGATCT ACCCGACCAG CCATTTTCTG ACGATCGCGC GCGGGACGTT TTCCAAAGCG TTGGATCTGT CCGATCTCTG GCCGTTATTT ATGCCGTTAC TGATTGCCGT CCCGGTGGTG ATGGGTCTGA GCATTCTGCT GCTGAAAAAA CAGGAGGGGT AA
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Protein sequence | MTSLKLVPVP PVAQLEGVSQ HYGKTAALNN ITLDIPARSM VGLIGPDGVG KSSLLSLISG ARVIEQGNVI VLGGDMRDAK HRRDVCPRIA WMPQGLGKNL YHTLSVYENV EFFARLFGHD KAEREARITE LLNSTGLAPF RDRPAGKLSG GMKQKLGLCC ALIHDPELLI LDEPTTGVDP LSRAQFWDLI DSIRQRQTNM SVLVATAYME EAERFDWLVA MNAGEILATG SAQQLRAKTH SATLEQAFIA LLPEAQRQAH KPVVIPPYHA EQEEIAIEAK DLTMRFGKFV AVDHVNFRIP RGEIFGFLGS NGCGKSTTMK MLTGLLPASE GQAWLFGQPV DPNDIDTRRR VGYMSQAFSL YNELTVRQNL ELHARLFHIP PAEIPARVAQ MIERFMLTEV EDTLPASLPL GIRQRLSLAV AVIHRPEMLI LDEPTSGVDP VARDMFWQLM VDLSRQDKVT IFISTHFMNE AERCDRMSLM HAGKVLASGT PQELVQQRGA ANLEAAFISW LQEAAGAAPE TPIPPSQTPA ASGKPSRQGL SFRRLFSYSR REALELRRDP VRSTLALLGT VILMLIMGYG ISMDVENLRF AVLDRDQTVS SQAWSLNLAG SRYFIEQPPL ASYDELDRRM RSGELAVAIE IPPNFGRDIA RGTPAQIGVW VDGAMPSRAE TVKGYVQAMH QSWLQEAASR QPNPVKQAGL LNIETRYRYN PDVKSLPAIV PAVIPLLLMM IPSMLSALSV VREKELGSMI NLYVTPTTRS EFLLGKQLPY IALGMLNFLL LCALSVFVFG VPLKGSFLTL TLAALLYVII ATGLGLLIST FMKSQIAAIF GTSIITLIPA TQFSGMIDPV ASLEGPGRWI GEIYPTSHFL TIARGTFSKA LDLSDLWPLF MPLLIAVPVV MGLSILLLKK QEG
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