Gene SeHA_C3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3852 
SymbolgntR 
ID6488971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp3725570 
End bp3726631 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content56% 
IMG OID642743960 
Producttranscriptional regulator GntR 
Protein accessionYP_002047566 
Protein GI194449580 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCATTAA TTCCGCATGT CCGTGGTAAA CTGGGCAAAT CTATCCCTTT TATACCTTTC 
AGGACGATGA AAAAGAAAAG ACCCGTACTT CAGGATGTGG CCGACCGTGT GGGCGTGACC 
AAAATGACGG TCAGCCGTTT TTTGCGTAAT CCGGAGCAGG TCTCCGTCGC GCTGCGGGGT 
AAAATTGCGG CTGCGCTTGA TGAGCTCGGG TACATTCCTA ATCGCGCGCC TGACATTCTT 
TCCAACGCCA CCAGTCGCGC CATTGGCGTT CTGCTGCCGT CTTTAACCAA CCAGGTCTTT 
GCGGAAGTGT TACGCGGCAT TGAGGCTGTC ACCGACGCGC ATGGTTATCA AACCATGCTG 
GCGCACTACG GCTATAAACC GGAGATGGAG CAGGAGCGCC TGGAATCGAT GCTCTCCTGG 
AATATCGACG GCCTGATCCT CACTGAGCGT ACCCATACGC CGCGCACCTT AAAAATGATC 
GAAGTCGCCG GGATTCCGGT GGTGGAACTG ATGGACAGCC AGTCGCCGTG TCTCGATATT 
GCCGTCGGTT TTGATAACTT CGAGGCCGCC CGTCAGATGA CCGCCGCGAT TATCGCGCGT 
GGTCATCGTC ATATCGCCTA TCTGGGGGCG CGCCTCGACG AACGTACTAT CATCAAGCAG 
AAGGGCTATG AACAGGCGAT GCGGGACGCA GGGCTGGTTC CTTACAGTGT GATGATGGAG 
CAATCTTCAT CCTACTCTTC CGGTATCGAA CTCATGCGCC AGGCGCGACG CGAATACCCA 
CAGCTTGACG GTATTTTTTG CACCAACGAT GACCTGGCGG TGGGGGCGGC CTTCGAATGC 
CAGCGCCTGG GGCTAAAAAT CCCGGACGAC ATGGCGATCG CCGGGTTCCA CGGTCATGAC 
ATCGGCCAGG TGATGGAACC GCGTCTGGCA AGCGTCCTGA CGCCACGCGA GCGAATGGGC 
AGCATTGGCG CGGAACGTCT GTTGGCCCGC ATTCGCGGCG AAACGGTCAC GCCGAAAATG 
TTAGATTTAG GTTTCACCTT GTCACCGGGC GGATCTATTT AG
 
Protein sequence
MSLIPHVRGK LGKSIPFIPF RTMKKKRPVL QDVADRVGVT KMTVSRFLRN PEQVSVALRG 
KIAAALDELG YIPNRAPDIL SNATSRAIGV LLPSLTNQVF AEVLRGIEAV TDAHGYQTML 
AHYGYKPEME QERLESMLSW NIDGLILTER THTPRTLKMI EVAGIPVVEL MDSQSPCLDI 
AVGFDNFEAA RQMTAAIIAR GHRHIAYLGA RLDERTIIKQ KGYEQAMRDA GLVPYSVMME 
QSSSYSSGIE LMRQARREYP QLDGIFCTND DLAVGAAFEC QRLGLKIPDD MAIAGFHGHD 
IGQVMEPRLA SVLTPRERMG SIGAERLLAR IRGETVTPKM LDLGFTLSPG GSI