Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3847 |
Symbol | glgB |
ID | 6487620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3719498 |
End bp | 3721684 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642743956 |
Product | glycogen branching enzyme |
Protein accession | YP_002047562 |
Protein GI | 194451703 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.579586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAGTC GTATCGATAG AGACGTGATT AATGCGCTAA TTGCAGGACA TTTTGCGGAC CCTTTTTCCG TACTCGGAAT GCACCAGACC CAAGCCGGAC TAGAAGTCCG CGCCCTCTTA CCTGACGCCA CCGACGTATG GGTGATTGAG CCCAAAACCG GACGTAAAGT CGGCAAACTG GAATGTCTCG ACGCTCGCGG TTTTTTCTGC GGCGTTTTAC CCCGACGTAA AAATTTCTTT CGCTATCAGC TCGCCGTGAC CTGGCACGGA CAGCAGAACC TCATCGACGA TCCTTACCGT TTTGGTCCAT TAATACAGGA AATGGATGCC TGGCTATTGT CGGAAGGCAC CCACCTGCGT CCTTATGAAA CGCTGGGCGC GCACGCCGAT ACGATGGATG GCGTCACCGG CACCCGTTTC TCCGTCTGGG CGCCTAATGC TCGTCGCGTT TCGGTTGTCG GGCAATTCAA CTATTGGGAT GGGCGTCGCC ACCCGATGCG TCTGCGCAAA GAGAGCGGTA TTTGGGAGCT GTTTATCCCC GGCGCGCATA ATGGACAACT GTATAAATTC GAGCTGCTTG ATGCGAACGG TAATCTGCGC ATTAAAGCCG ATCCCTATGC TTTTGAGGCG CAGATGCGTC CGGAAACGGC GTCGATGATT TGCGGACTGC CGGAGAAAGT GACGCCAGGC GAAGAACGAC AAAAAGCCAA TCAGTTTGAT GCGCCGATCT CGATTTATGA GGTGCATTTA GGTTCATGGC GCCGCCATAC GGATAACAAT TTCTGGCTGA GCTATCGTGA GCTGGCGGAT CAGCTTGTGC CTTACGCCAA ATGGATGGGC TTTACTCACC TTGAACTCTT GCCGGTCAAC GAACATCCGT TTGACGGCAG TTGGGGCTAC CAGCCGACCG GCCTCTACGC GCCGACCCGC CGCTTTGGTA CGCGAGACGA CTTCCGTTAT TTCATCAATG CGGCCCATGC GGCGGGCCTT AACGTCATTC TCGACTGGGT GCCGGGCCAT TTCCCGTCCG ATGAATTTAG CCTCGCGGAG TTTGACGGCA CCCACCTCTA TGAGCACAGC GACCCGCGCG AGGGCTATCA CCAGGACTGG AATACGCTGA TCTACAACTA TGGTCGTCGT GAAGTCAGTA ATTATCTGGT GGGTAACGCC CTGTACTGGA TGGAGCGTTT TGGGATTGAT GCGCTGCGTG TCGATGCGGT GGCCTCTATG ATCTACCGCG ACTACAGCCG CAAAGAGGGC GAGTGGATAC CGAACGAGTT CGGCGGTCGT GAAAACCTGG AAGCCATTGA GTTTCTGCGT AATACCAACC GCATTATTGG CGAGCAGGTG CCCGGCGCGG TCAGCATGGC GGAAGAGTCG ACAGACTTCT CTGGCGTGAC GCGTCCACCG GAAACGGGTG GGCTGGGGTT CTGGTACAAG TGGAATCTGG GCTGGATGCA CGACACGCTG GACTACATGA AGCTGGACCC GGTGTACCGC CAGTATCATC ACGACAAGCT GACCTTTGGT ATGTTGTACA ACCATACCGA AAACTTTGTT CTGCCGCTGT CGCACGATGA GGTGGTTCAC GGCAAGAAAT CCATTCTCGA TCGTATGCCG GGCGATGCGT GGCAAAAATT CGCCAACCTG CGCGCCTATT ATGGTTGGAT GTGGGCCTTC CCCGGCAAGA AACTGCTGTT TATGGGGAAT GAGTTTGCCC AGGGACGCGA GTGGAACCAT GACGCCAGCC TCGACTGGCA CCTGCTGGAG GGGGGCGATA ACTGGCACCA CGGGGTTCAG CGTCTGGTGC GCGATCTCAA CCACACCTAT CGCCACCATA AAGCGTTGCA TGAGCTGGAT TTTGATGCTT ACGGCTTTGA GTGGCTGGTG GTCGATGACA ATGAACGCTC GGTACTGATT TTTGTACGCC GTGATAAAGC CGGTAACGAG ATCATCGTCG CCAGCAACTT TACGCCCGTT CCTCGCCACG ACTACCGCTT TGGCATCAAC CAGCCGGGAC GCTGGCGTGA AATTCTCAAT ACTGATTCGA TGCATTATCA CGGTAGCAAC ACCGGCAATG GCGGCGTGGT GCACAGCGAT GAGATCGAAA GCCATGGCCG TCAGCACTCT CTTAACCTGA CGTTACCGCC GTTGGCGACG ATCTGGCTGA TGCGGGAGGG GGAATGA
|
Protein sequence | MSSRIDRDVI NALIAGHFAD PFSVLGMHQT QAGLEVRALL PDATDVWVIE PKTGRKVGKL ECLDARGFFC GVLPRRKNFF RYQLAVTWHG QQNLIDDPYR FGPLIQEMDA WLLSEGTHLR PYETLGAHAD TMDGVTGTRF SVWAPNARRV SVVGQFNYWD GRRHPMRLRK ESGIWELFIP GAHNGQLYKF ELLDANGNLR IKADPYAFEA QMRPETASMI CGLPEKVTPG EERQKANQFD APISIYEVHL GSWRRHTDNN FWLSYRELAD QLVPYAKWMG FTHLELLPVN EHPFDGSWGY QPTGLYAPTR RFGTRDDFRY FINAAHAAGL NVILDWVPGH FPSDEFSLAE FDGTHLYEHS DPREGYHQDW NTLIYNYGRR EVSNYLVGNA LYWMERFGID ALRVDAVASM IYRDYSRKEG EWIPNEFGGR ENLEAIEFLR NTNRIIGEQV PGAVSMAEES TDFSGVTRPP ETGGLGFWYK WNLGWMHDTL DYMKLDPVYR QYHHDKLTFG MLYNHTENFV LPLSHDEVVH GKKSILDRMP GDAWQKFANL RAYYGWMWAF PGKKLLFMGN EFAQGREWNH DASLDWHLLE GGDNWHHGVQ RLVRDLNHTY RHHKALHELD FDAYGFEWLV VDDNERSVLI FVRRDKAGNE IIVASNFTPV PRHDYRFGIN QPGRWREILN TDSMHYHGSN TGNGGVVHSD EIESHGRQHS LNLTLPPLAT IWLMREGE
|
| |