| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3760 |
|---|
| Symbol | slyD |
|---|
| ID | 6489099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3620609 |
|---|
| End bp | 3621199 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642743872 |
|---|
| Product | FKBP-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_002047478 |
|---|
| Protein GI | 194451090 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0330283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.231738 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAG CAAAAGACCT GGTGGTCAGC CTGGCCTATC AGGTACGTAC AGAAGACGGT
GTGTTGGTTG ATGAGTCTCC GGTGAGTGCG CCGCTGGATT ACCTGCACGG TCACGGCTCC
CTGATCTCTG GTCTGGAAAC CGCGCTGGAA GGCCATGAAG TTGGCGACAA ATTTGATGTC
GCTGTTGGCG CGAACGACGC TTACGGTCAG TATGACGAAA ATCTGGTGCA GCGTGTGCCT
AAAGACGTCT TTATGGGCGT TGATGAACTG CAGGTAGGGA TGCGTTTCCT GGCGGAAACC
GACCAGGGCC CGGTACCGGT AGAGATTACC GAAGTGGAAG ACGATCACGT TGTGGTTGAT
GGTAACCACA TGCTGGCGGG CCAGAATCTG AAATTTAACG TAGAAGTTGT TGCGATTCGT
GAAGCGACTG AAGAAGAACT GGCTCACGGT CATGTTCATG GCGCGCACGA TCACCACCAC
GATCACGGTG AAGATGGCTG CTGTGGCGGT CATGGTCATG ACCATGGTCA CGAGCACGGC
GGCGAAGGCT GCTGCGGCGG TGGTGGTAAA GGCGGCTGCG GTTGCCATTA A
|
|---|
| Protein sequence | MKVAKDLVVS LAYQVRTEDG VLVDESPVSA PLDYLHGHGS LISGLETALE GHEVGDKFDV
AVGANDAYGQ YDENLVQRVP KDVFMGVDEL QVGMRFLAET DQGPVPVEIT EVEDDHVVVD
GNHMLAGQNL KFNVEVVAIR EATEEELAHG HVHGAHDHHH DHGEDGCCGG HGHDHGHEHG
GEGCCGGGGK GGCGCH
|
|---|
| |