Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3732 |
Symbol | rplE |
ID | 6491596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3604455 |
End bp | 3604994 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642743845 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_002047451 |
Protein GI | 194447957 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0475697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.0194704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAC TGCATGATTA CTACAAAGAC GAAGTAGTTA ACAAACTCAT GACTGAGTTT AACTACAATT CTGTCATGCA AGTCCCTCGG GTCGAGAAGA TCACCCTGAA CATGGGTGTT GGTGAAGCGA TCGCTGACAA GAAACTGCTG GATAACGCAG CAGCAGACCT GACAGCAATC TCCGGTCAAA AACCGTTGAT CACCAAAGCA CGCAAATCTG TTGCAGGCTT CAAAATCCGT CAGGGCTATC CGATCGGCTG TAAAGTAACT CTGCGTGGCG AACGCATGTG GGAGTTCTTT GAGCGCCTGA TCACTATTGC TGTTCCTCGT ATCCGTGACT TCCGTGGCTT GTCCGCTAAG TCATTCGACG GTCGTGGTAA CTACAGCATG GGTGTCCGTG AGCAGATCAT CTTCCCAGAA ATCGACTACG ATAAAGTCGA CCGCGTTCGT GGTTTGGATA TTACCATTAC CACTACTGCG AAATCTGACG AAGAAGGCCG TGCTCTGCTG GCTGCCTTTG ACTTCCCGTT CCGCAAGTAA
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Protein sequence | MAKLHDYYKD EVVNKLMTEF NYNSVMQVPR VEKITLNMGV GEAIADKKLL DNAAADLTAI SGQKPLITKA RKSVAGFKIR QGYPIGCKVT LRGERMWEFF ERLITIAVPR IRDFRGLSAK SFDGRGNYSM GVREQIIFPE IDYDKVDRVR GLDITITTTA KSDEEGRALL AAFDFPFRK
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